Gene detail information of Glyur000207s00015921 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| NR | XP_007160581.1 | 1.03E-14 | hypothetical protein PHAVU_001G0001001g, partial [Phaseolus vulgaris] |
| trEMBL | tr|V7CTG7|V7CTG7_PHAVU | 4.00E-15 | Uncharacterized protein {ECO:0000313|EMBL:ESW32575.1} (Fragment) |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00207 | 248497 | 252384 | + |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur000207s00015921.1 | PF00385.19 | Chromo | 150 | 186 | 0.00018 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 14.749 |
| SRR1783600 | control | 14.247 |
| SRR1783602 | moderate drought stress | 9.710 |
| SRR1811619 | moderate drought stress | 8.830 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 7.295 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 6.371 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 4.566 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 3.514 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 6.349 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 7.723 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 5.588 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 4.277 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 0.000 |
| SRR2868004 | Drought Stress (root) | 0.006 |
| SRR2967015 | Control (root) | 0.000 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 0.000 |
| SRR9715740 | Leaf | 0.000 |
| SRR9715741 | Leaf | 0.000 |
| SRR9715739 | Root | 0.000 |
| SRR9715742 | Root | 0.003 |
| SRR9715743 | Root | 0.000 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 0.157 |
| SRR8749028 | MeJA induced 9h | 0.085 |
| SRR8749029 | MeJA induced 9h | 0.060 |
| SRR8749030 | Uninduced | 0.000 |
| SRR8749031 | Uninduced | 0.000 |
| SRR8749032 | Uninduced | 0.000 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 0.000 |
| SRR8400027 | Control - Root | 0.008 |