Gene detail

Gene detail information of Glyur000207s00015909

Functional Annotation

Database	Orthologs	E value	Annotation
TAIR	AT5G51540.1	0	Zincin-like metalloproteases family protein
NR	XP_004499672.1	0	PREDICTED: mitochondrial intermediate peptidase-like isoform X1 [Cicer arietinum]
COG	YP_006433175.1	2.00E-79	Zn-dependent oligopeptidase [Flexibacter litoralis DSM 6794]
Swissprot	tr\|F4KDA5\|MIPEP_ARATH	0	Probable mitochondrial intermediate peptidase, mitochondrial (Precursor)
trEMBL	tr\|V7BUI8\|V7BUI8_PHAVU	0	Uncharacterized protein {ECO:0000313\|EMBL:ESW20688.1}

Sequence

Transcript Sequence

>Glyur000207s00015909.1
AGCAGGCAAGGCACTTAGCCGCTTCCCTGCGAATCAAATCCAAGAATCACAAGAAAACCGTTAACGATGTGGAGTATCGCCAAGAAAGCCGTTCAACTCTTCNGTACACACAACAAACGGAGTTCCTTCACTCTCCTCCACCACCGCACCTTCTCCTCCACCGCCACTCCTACTCCCACAGGTCTCTATGGTCTCCACCACTTGAAGACTCCAAAAGGCTTCCAATCTTTCGCCGACGAAGCCATTCAAAGGTGTGAANAACTCGTCAGTTACATTTCTACGAAGCCGCCAGCTTCGGAATTGATGCGAGCAATGGATGACATTTCTGACACCGTCTGTTCTGTTGTTGACTCTGCTGAATTGTGTAGGCAAACCCATCCTAACAGGGAATTTGTTCAGGAGGCTATTAAGGCATCGATGAGAATTAATGAATATCTACATTATCTGAACACAAATCATGAACTCTATGATGCGGCGAAGAAAGCTGAGAAAGAATGTCATATGCTCTCCGAGGAAGCTCAAAGGGGAGTTAGAAGCTTATGTGTTGATATGGAAAGGGGTGGAATCCATCTTTGCCCTGAGAAATTAGATCGAGTGAACATGCTAAATATTGAAATTTCTCAGCTATGCAGAGAGTACAATGAAAATATTGTCATGGACCCAGGATATGTCGATATATATCCTTCATCTCGCGTCCCAAAAAATTTGCATCATCTTGTTAAGCCTGTCTACCGTTCAGAATCTTCAATAACTAAGGATTTATCGGGGTCCAAGGATGCCCTTAAAGAGAAAGGATTTCGAATTACAACAGACCCACAAACTATTGATTCTGTGCTACAATTGTCATCGGATGATGAGATTAGGAAAATGGTATATATACAAGGAAATTCTGTTCCACGAGCAAATGTTGATCTCCTCAAGAGGCTTATATCTGCTCGACATGAGCTAGCTCAGATAATGGGGTGTAGATCTTATGCCGAACTTGCTGTTAAGCCTAACATGGCTTCATCACCAAAAGTTGTAATGTCATTTTTACTTGAAATGAGCAAGATGGTCCGGACTCAGTCTGAAGAGGAGCTCAAGTTACTTACAAAATTCAAGAGAGAAAAATGTGGTCAAAGTGATGGAGATTTAAGGCCATGGGATGAAACCTATTACATGACAATGATGAAATCCTCTGTGTATAAGTTGGACTTTTCGGTTGTAGCATCATATTTTTCTTTGTCAAACTGTATTGAGGGTTTGAAGATTCTGGTGCAGTCATTGTTTGGTGCAACCTTTCATAGCATCCCTCTAACACCTGGTGAATCATGGGATCCACAAGTGCTTAAACTGTCTCTTCATCATCCTGAGGAGGGTGACTTGGGATATCTCTACCTTGATTTGTACTCGAGAAAGGGAAAGTATCCTGGTTGTGCTCATTTTGCAATTAAAGGGGGTCGCAGGATTTCTCAAACAGAATACCAACTTCCTATTGTAGCTCTTGTTTGTAATTTCTCGGGTTCGCGGAATGCATCAGCTGTAAGGCTTAATCATTGGGAAGTGGAAACTCTATTTCATGAGTTTGGACATGCTCTTCATTCACTGCTTTCAAGAACGGACTACCAACATTTTTCAGGCACAAGAACAGTTCTTGATTTTGCGGAAATACCATCAAACCTCTTTGAATACTATGCATGGGATTATCGAGTTTTGAAAAAATTTGCAAGACACTATTCAACTGGTGAAGAAATCCCTCATAAGCTAGTTGAGTCGATTCTGGGTGCCAAACATATGTTTGCTGCAACTGATCTGCAACGTCAGATCTTCTATGCCCTAGTTGACCAGACACTTTTTGGAGAGCAACCACTCCCTTATGGTGANAGTAGTTCTGTTGTTGCAGAACTGAAAAGAGAGCATACCAATTTGGAACATGTGGAAGGCACACACTGGGAGGCTCGATTTAGTCATCTCCTTAATTATGGTGGAGGGTATTATAGCTATTTGTATGCCAAATGTTTTGCTGCAACCATATGGAAGAAGTTGTGCCAGGAGGATCCGCTATCAATAACTACAGGCTTTGCTTTAAGAACTAAATTCTTACAGCATGGAGGAGCCAGAGAACCAGCTGCTTTGTTAAATGATCTAGCAGGTGATGGGATATATAGGTGCCATGATGGAGGGATAGTCCCTGATATTTCAAGTCTTTGTGAGGAAATGAAACGGATTGAAGAATATCAGAAGCAAGTCCATTTGTTGTGAGGTTAAAGAAATTGGACAGAACCCAACTAGCACTGAGCAAAAGTGATTTATGTCCAGAGAAACATGTGGCAAATGAAGAAGCACTTACTGGGTTGAGTTCTGCGGGTGTCAATAGTAGCATCCTGGAGTTGTTGGCCAAACGTTCCAGATNTCATACTATTTTTTGGGTCCAATTCCAAATCTCAAACTATTCAGTCAAAATTTGAGGCCTTATTTAGGTCTCTGTGTCAATCGCACAAATGGAACTCACATTTGAGAATCGAT

Protein Sequence

Location information (JBrowse)

Scaffold	Start	End	Strand
Scaffold00207	149658	161707	+

Gene family

Gene family	subfamily
--	--

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID
--	--	--	--	--

Gene Ontology

biological_process
GO:0006508 proteolysis

molecular_function

GO:0004222 metalloendopeptidase activity

GO:0008237 metallopeptidase activity

Pfam domain

Protein	Pfam accession	Pfam name	Alignment start	Alignment end	E-value
Glyur000207s00015909.1	PF01432.15	Peptidase_M3	257	690	1.10E-115

Expression pattern

SRP053019

SRA Experiment	Description	TPM
SRR1783599	control	2.031
SRR1783600	control	2.069
SRR1783602	moderate drought stress	2.753
SRR1811619	moderate drought stress	2.709

DRP000996

SRA Experiment	Description	TPM
DRR006519	Root Summer glycyrrhizin high producing strain	2.618
DRR006520	Root Summer glycyrrhizin high producing strain	2.723
DRR006521	Root Winter glycyrrhizin high producing strain	2.605
DRR006522	Root Winter glycyrrhizin high producing strain	2.416
DRR006523	Root Summer glycyrrhizin low producing strain	2.005
DRR006524	Root Summer glycyrrhizin low producing strain	2.200
DRR006525	Leaf Summer glycyrrhizin high producing strain	2.096
DRR006526	Leaf Summer glycyrrhizin high producing strain	2.102

SRP065514

SRA Experiment	Description	TPM
SRR2867873	Salt Stress (root)	7.375
SRR2868004	Drought Stress (root)	7.893
SRR2967015	Control (root)	8.695

SRP215420

SRA Experiment	Description	TPM
SRR9715738	Leaf	3.427
SRR9715740	Leaf	4.870
SRR9715741	Leaf	5.184
SRR9715739	Root	0.585
SRR9715742	Root	2.150
SRR9715743	Root	2.111

SRP188776

SRA Experiment	Description	TPM
SRR8749027	MeJA induced 9h	5.168
SRR8749028	MeJA induced 9h	5.878
SRR8749029	MeJA induced 9h	2.733
SRR8749030	Uninduced	2.877
SRR8749031	Uninduced	1.191
SRR8749032	Uninduced	0.876

SRP175571

SRA Experiment	Description	TPM
SRR8400026	NaCl treatment - Root	5.908
SRR8400027	Control - Root	5.536