Gene detail information of Glyur000207s00015907 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT2G31725.1 | 3.00E-54 | Eukaryotic protein of unknown function (DUF842) |
| NR | XP_004499670.1 | 1.28E-97 | PREDICTED: protein FAM136A-like [Cicer arietinum] |
| trEMBL | tr|C6T0J4|C6T0J4_SOYBN | 2.00E-90 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA06G47800.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00207 | 138157 | 141840 | + |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur000207s00015907.1 | PF05811.8 | DUF842 | 67 | 193 | 6.00E-38 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 8.076 |
| SRR1783600 | control | 8.044 |
| SRR1783602 | moderate drought stress | 4.471 |
| SRR1811619 | moderate drought stress | 4.348 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 7.769 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 7.889 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 6.381 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 5.987 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 8.910 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 8.817 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 4.575 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 4.669 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 22.456 |
| SRR2868004 | Drought Stress (root) | 11.340 |
| SRR2967015 | Control (root) | 9.323 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 4.206 |
| SRR9715740 | Leaf | 7.049 |
| SRR9715741 | Leaf | 5.195 |
| SRR9715739 | Root | 2.100 |
| SRR9715742 | Root | 4.575 |
| SRR9715743 | Root | 3.075 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 56.491 |
| SRR8749028 | MeJA induced 9h | 24.716 |
| SRR8749029 | MeJA induced 9h | 38.661 |
| SRR8749030 | Uninduced | 9.754 |
| SRR8749031 | Uninduced | 8.671 |
| SRR8749032 | Uninduced | 12.026 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 8.519 |
| SRR8400027 | Control - Root | 7.563 |