Gene detail information of Glyur000207s00015904 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00207 | 121922 | 122161 | - |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur000207s00015904.1 | PF13456.1 | RVT_3 | 14 | 77 | 1.70E-06 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 2.150 |
| SRR1783600 | control | 2.568 |
| SRR1783602 | moderate drought stress | 9.627 |
| SRR1811619 | moderate drought stress | 5.148 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 2.903 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 2.930 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 0.759 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 0.681 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 1.918 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 1.861 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 0.263 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 0.579 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 1.031 |
| SRR2868004 | Drought Stress (root) | 0.628 |
| SRR2967015 | Control (root) | 1.956 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 0.527 |
| SRR9715740 | Leaf | 0.000 |
| SRR9715741 | Leaf | 2.285 |
| SRR9715739 | Root | 0.000 |
| SRR9715742 | Root | 0.230 |
| SRR9715743 | Root | 0.010 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 0.904 |
| SRR8749028 | MeJA induced 9h | 0.355 |
| SRR8749029 | MeJA induced 9h | 0.427 |
| SRR8749030 | Uninduced | 0.242 |
| SRR8749031 | Uninduced | 0.160 |
| SRR8749032 | Uninduced | 0.960 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 0.018 |
| SRR8400027 | Control - Root | 0.383 |