Gene detail

Gene detail information of Glyur000206s00012598.1

Functional Annotation

Database	Orthologs	E value	Annotation
TAIR	AT3G12150.1	8.00E-177
NR	KHN07405.1	0	Cytochrome P450 93A1 [Glycine soja]
COG	YP_634971.1	3.00E-47	hypothetical protein MXAN_6854 [Myxococcus xanthus DK 1622]
Swissprot	tr\|O81973\|C93A3_SOYBN	0	Cytochrome P450 93A3
trEMBL	tr\|I1JNH6\|I1JNH6_SOYBN	0	Uncharacterized protein {ECO:0000313\|EnsemblPlants:GLYMA03G29780.1}

Sequence

Transcript Sequence

>Glyur000206s00012598.1
ATGGCTACTGAAGGTGCTAGTGTTTTCTTCTACACCTTCTCCTCCACCTTNGCTTTGCTAATTTTCACGTTAATTGTGAAGTCCCTTAGCATCCGAACCACAAATCGTAGCAGCTCCAACAAAGTTGGGCCCCCACCAAGCCCACCATCATTACCCATCATAGGCCACCTTCACCTTCTGGGCTCAGTGATACCAAAATCATTTCAAACCCTGGCTCGCCTCTATGGCCCACTGATCCAGCTCCACCTAGGTGCCTCAACCTGCGTGGTTGTCTCCAATGCCCAAGTTGCCAAACAAGTCATGAAAACACACGACCTTAATTTCTGCTACCGACCTCAATTTGGTTCCTCGGAGTATTTCCTTTACAAAGGGTCTTATTTCATCACTGCCCCATATGGCCCTTATTGGCGGTTCATGAAAAAGCTATGCGTGACTCAGCTACTCTCGAGTTCACTACATGGCCGNTATATGCATATACGAGAACAAGAGATAGAGAAGCTATTGAAATCTCTAGTGGTGTGTTCCAGTGAGGGAAGGTCCACGGATTTGAGCTTGGACCTCACTTCTTTGACCAATAATATCCTTTGTCGCATGGCTATGAGCACGACTTGCTTCGAGAAGGGTAATGATGCCGAGGAGATTCAGCGATTGGTGAGGGAGTTCTTGCATGTTGGAGCTAAATTGAGCATGGGTGAGGTGCTTGGACCTTTGGGGAAGTTTGACTTGTTTGGGTATGGGAAAAGGCTTAGGAAAATAGTGGGAGAGTTTGACCAGATTTTGGAACGCATCATGGAGGAACATGAAGAGAAGAAAAACACCGAGACTTGTCATGGAGACATGATGGATATCCTATTACAAGTCTCTAGAAATCCAAATGCTGAAGTGAGGGTAACAAGGAATGATATCAAGGCCTTCTTCCTAGACATTTTCCTAGCGGGAACAGACACCTCTTCAGTGGCAATGCAATGGGCGATGGCAGAGATAATGAACAACCCAGGAGTGTTAAAGAAGATAAAGGCAGAGGTTGAAGCTGTGGTGGGGACCACCAGGCTTGTTAAGGAATCAGACGTTCCAAATATGCCTTACCTACAAGCTGTTGTGAAGGAAGTGCTGAGACTCCATCCAACGGCTCCGCTTGCGCTAAGACAATCAGCAGAGGACTGCAGCATCAACGGCTACGATGTAAAGGGCCAAACCAGGACACTGATCAACGTCTATGCCATCATGCGGGACCCAGAAGCATGGGTCAACCCAGAGGATTTTATACCAGAGAGGTTCCTCCTGGATGGTGAGATCAACGGTGGAGATGAAAGTGTGATGATTAAAATGGACGGTAGTGATTTCAGGTATATTCCGTTTGGGTTTGGCAGGAGAGGGTGTCCTGGTGCTTCCCTTGCTTTGACGGTTATGCAAGTGACGATTGCGACATTGGTACAGTGTTTTGAATGGAAAATCAAAGGGGAAGATAAGGTCAATATGGAAGAAGGGTTCAAATTAATTAATATGGCTGATTACCAAAGCTACACCCTACTTTTTATCCTATGGCTAGTGTCCATAATCGTGGTTCGAACCATTCTCACCAGAAAACAGAACAAGGCTCATGTACCACCAAGCCCACTAGCCTTACCCATAATTGGACACCTTCACCTTCTTGCACCAATACCCCATCAAGCTCTTCACAAGCTATCAACACGCTATGGACCCATAATGCAACTTTCCCTTGGTTCCGTCCCTTGCCTCGTGGCTTCAACACCAGAATCCGCCAAAGAGTTCCTTAAAACCCACGAGACCAAATTCTCCAACCGTCCTCAAAGCTCTGCTGTTCATTACCTAACATATGGTTCCCAAGACTTCTCCTTTGCCCCATATGGACCTTATTGGAAATTCATGAAGAGAATATGCATGTCTGAACTTCTTGGGGGTCACACACTCACACTGCTTCTTCCCGTGAGAAAACAAGAGACGACAAGGTTTCTTAGACTCTTGCTAAAGAAAGGGAATGCAGGTGAGACTGTTGATGTTGGAGGGGAACTTCTGACACTGTCGAATAACATTGTTTCGAGGATGATTATGAGCCAAACTTGCTCAGAAGAAGATGATGGGGAAGGGGAAGAAGTGGTGAGGAAGTTGGTGCAAGACACGGTGCTTCTCACGGGGAAGTTTAATGTCTCGGACTTTGTTTGGTTCTTTAAGAATTGGGATTTGCAGGGGTTTGGTAAAAGGCTTAGGGAGATTCGGGAGAGGTTTGATACCATGATGGAGAAGGTGATCAAGGAGCATGAAGAGGAGAGGAGGAAGAGAAAAGAAGTTGGTGGAGGAGATGGTCGAGTCAAGGATCTACTCGATATATTGTTGGATATAGCTGAAGATGAGAGCTCTGACATAAAATTGACAATGGAGAACATAAAGGCCTTCATCTTGGACATATTTATGGCAGGAACAGACACTTCAGCGCTAACCACTGAATGGGCTCTGGCAGAGTTGATTAACCACCCAAATGTGATGGAGAGAGCAAGAAAAGAGATTGATGATGTAGTTGGGAAAACTAGAATAGTAGAAGAATCAGACCTTGTCAACCTTCCTTATCTACAAGCTATAGTCAAAGAAACACTGAGGATTCACCCCACAGGTCCTTTAATTGTTAGAGAATCATCTGAAAAATGCACCATATGGGGCTATGAGATTCCAGCAAAGACACAATTGTTTGTTAATGTGTGGTCTATTGGCAGGGACCCCAATCACTGGGAGAACCCACTTGAGTTCAAACCAGAGAGATTTATTGGTGAGGAGGGAAGTGGGAAGAGTCAGTTAGATGTGAGGGGACAACATTTTCACCTAATTCCATTTGGGAGTGGAAGAAGAGGGTGCCCTGGAACCTCACTGGCTTTGCAGGTTGTGCAGACAAACCTTGCTGCTATGATTCAGTGTTTTGAATGGAAGGTTAATAATAATGCAGGCAATAATTATGAGACTGTAGTTAACATGGAAGAGAAACCTGGGTTAACACTTTCAAGGGCTTATCCGTTAATATGTGTCCCAATGCCTAGGCTTAGTCCTTTTCCTTCAATCCAACAAAAAAACACTTCACACGATATCCAAGGTATGGCTGATTTTCAAGACTATCTTCAAATCTTCCTCATTTGTGTTCTATCCACCATCCTAGTTGGTTCCATACTATGGAGAAAACAAAACAAGCACCCTCATCCACCAGGTCCCTTAGCCCTACCCATCATTGGCCACTTCCACCTTTTGGCCCTTCTCTCCCCACTACTTCACTCTGCTTTTCACAAACTCTCAATCCACTATGGCCCCATAATGCTCCTTTTCATGGGCTCTGTCCCTTGTATTGTAGTTTCCACCGCAGAAGCTGCCAAAGAGTTTCTCAAAACTCATGAAACCTCCTTTTCCAACCGTGCAAGAACTGTTGCCATTGAGACCTATAGCTATGGTCTTCAAGGCATAGTCTTTACACCCTATGGAGACTATTGGAGGTTTATTAAGAAATTGTGCATGTCTGAACTTCTTGGTCAAAATATATTGAATCGATTCCTTGCTGTGAGGCAGCAAGAGACCGAGAGGTTCATCAAACTTGTGTTCAATAAAGGGGTGGAAGGTGAGGCTGTGGATTTTGGGGAACAATTCATGAAGCTTGCAAATAATATCATGTCAAGAATGACCATTAGTCAAACAAGTTCTAAGAATGATGATGAAGCAAACGAGATGATGAAGATGGTGGCAGATATTACAGAGATCTTAGGGGNGTTCAATATATCGGAATTCATTTGGTTCTTGAAGAGGTTCAATCTACAGGGACACAACAAGAGGCTAAAGGAAGTTCATGACAAGTTTGATACCAGGCTGAACAGACTGATAAAAGAGCATGAAGAGGAAAGAAGGAAGAGAAAGGAAATGGNTGGAAGTGGAACTCATCAATCTAAGGATATACTTGATGTGTTATTAGATATATATGAAGATAAAAGTTCAGAAATGAAATTGACTAAAGAGAACATAAAGGCCTTCATCTTGGACATATTTCTTGCTGGGACTGACACGTCAGCATTGACCCTAGACTGGGCTATAGCAGAATTGATCAACAACCCACATGTGATGGAGAAAGCAAGGCAAGAGATAGATGCAGTGGTTGGAAAGAGTAGAATAGTGGAAGAATCTGATGTTATGAATCTTCCTCACTTGCAAGCCATAGTTAAAGAAACATTAAGGCTTCACCCTGTAGTTCCGATGATTTTCAGGGAGTCATCTAGAAGGGATATAGTTGGTGGTTATGATATTCCAGCCAAGTCTAAAGTATTTATCAATATTTGGGCTATTGGTAGGGACCCCAATCACTGGGAGAACCCACTTGAGTTTAGGCCAGAAAGGTTTATAGGTGAAGATAATGATCAAATGGATGTTAGGGGACAACATTATCATTTGATTCCATTTGGGAGTGGAAGAAGAGTGTGTCCTGGAACCTCTTTGGCATTGCAGGTTTTGCATGTGAACCTGGGTGCTGTGATTCAATGTTTCGAGTTGAAGGTTGAAGGTGGCAATGGCACGATTGACATGGCAGAGAAGCCTGGCATGACTATGCGCAGGGCTCAACCTCTCATCTGTGTCCCTCTTCCAAGGCTTAATCCATTTCCTTCTATTTTTGAACTTTGTGGGAAAACAATGGTGACGGTGAATCTGGGTATGCTTCATTATGTGTTGGACCACGTTTATGGGGCATTCATGCACCGGACTAAGATCAGCACCCCATTCTTCTCAAGGGGATGGGGTGGCACGAAACTTGATATGCTTGAGAAGATGATAAGGCAATTGTTCCCAGATTTGGCTGGGCAAAATTGGCCTCCAACTTTGATTCAACCCGTTTGGAGGACCATATGGGAGACCAAGACGGCTTGTTTNAGAGAAGGGGTATTCAGAACCCCTTGTGAGGAGCAACTCCTTGCTGCATTGCCCCCTGAGAGCCACCTTGCAAGGGTTGCATTCCTCATGCCCAAGTCTGTTCCCCCTCACAGAATGGCATGTGTAGTTCATCTTGCAGGAACTGGGGACCATACATTTGAAAGAAGATTGCGTCTTGGTGGTCCATTGGTGAAGGAAAACATTGCAACCATGGTGCTTGAGAGTCCATTCTATGGACAAAGACGTCCTCTGCTGCAGCGTGGTGCAAAACTTTTGTGTGTTAGTGACTTGCTTTTATTAGGAAGAACAACCATTGAAGAGGCACGTAGTCTCTTATACTGGTTGGACTCTGAAGCAGGTTTTGGCAAGATGGGTGTTTGTGGACTTAGTATGGGAGGAGTACATGCTGCCATGGTTGGATCACTTCACCCTACACCTATTGCTACACTTCCTTTTCTCTCACCACATTCTGCCGTTGTGGCATTCTGTGAGGGGATTTTAAAGCACGGCACTGCCTGGGAGGCGCTGAGAGAGGACCTTGCAGCCCAGAAGGCTGCAATGACNCTCGAGGAGGTGAGAGAACGGATGAGAAATGTGCTGTCACTCACAGATGTCACACGCTTTCCAATTCCCAAAAACCCNAATGCTGTAATCTTGGTTGCTGCTACTGATGATGGATACATCCCAAAACACTCGGTCCTACAACTTCAGAAAGCTTGGCCAGGTTCTGAGGTGAGATGGGTCACGGGTGGGCATGTCTCGTCCTTCCTTCTCCATAATGGTGAGTTCAGAAGAGCNATTGTCGATGGTCTTGATAGATTACCATGGAAAGAGTCTCCATTACACAAGAGGGGCAGGACAAGTTCACATTGTGGACATGATATCCAGCTGTGA

Protein Sequence

>Glyur000206s00012598.1
MATEGASVFFYTFSSTXALLIFTLIVKSLSIRTTNRSSSNKVGPPPSPPSLPIIGHLHLLGSVIPKSFQTLARLYGPLIQLHLGASTCVVVSNAQVAKQVMKTHDLNFCYRPQFGSSEYFLYKGSYFITAPYGPYWRFMKKLCVTQLLSSSLHGRYMHIREQEIEKLLKSLVVCSSEGRSTDLSLDLTSLTNNILCRMAMSTTCFEKGNDAEEIQRLVREFLHVGAKLSMGEVLGPLGKFDLFGYGKRLRKIVGEFDQILERIMEEHEEKKNTETCHGDMMDILLQVSRNPNAEVRVTRNDIKAFFLDIFLAGTDTSSVAMQWAMAEIMNNPGVLKKIKAEVEAVVGTTRLVKESDVPNMPYLQAVVKEVLRLHPTAPLALRQSAEDCSINGYDVKGQTRTLINVYAIMRDPEAWVNPEDFIPERFLLDGEINGGDESVMIKMDGSDFRYIPFGFGRRGCPGASLALTVMQVTIATLVQCFEWKIKGEDKVNMEEGFKLINMADYQSYTLLFILWLVSIIVVRTILTRKQNKAHVPPSPLALPIIGHLHLLAPIPHQALHKLSTRYGPIMQLSLGSVPCLVASTPESAKEFLKTHETKFSNRPQSSAVHYLTYGSQDFSFAPYGPYWKFMKRICMSELLGGHTLTLLLPVRKQETTRFLRLLLKKGNAGETVDVGGELLTLSNNIVSRMIMSQTCSEEDDGEGEEVVRKLVQDTVLLTGKFNVSDFVWFFKNWDLQGFGKRLREIRERFDTMMEKVIKEHEEERRKRKEVGGGDGRVKDLLDILLDIAEDESSDIKLTMENIKAFILDIFMAGTDTSALTTEWALAELINHPNVMERARKEIDDVVGKTRIVEESDLVNLPYLQAIVKETLRIHPTGPLIVRESSEKCTIWGYEIPAKTQLFVNVWSIGRDPNHWENPLEFKPERFIGEEGSGKSQLDVRGQHFHLIPFGSGRRGCPGTSLALQVVQTNLAAMIQCFEWKVNNNAGNNYETVVNMEEKPGLTLSRAYPLICVPMPRLSPFPSIQQKNTSHDIQGMADFQDYLQIFLICVLSTILVGSILWRKQNKHPHPPGPLALPIIGHFHLLALLSPLLHSAFHKLSIHYGPIMLLFMGSVPCIVVSTAEAAKEFLKTHETSFSNRARTVAIETYSYGLQGIVFTPYGDYWRFIKKLCMSELLGQNILNRFLAVRQQETERFIKLVFNKGVEGEAVDFGEQFMKLANNIMSRMTISQTSSKNDDEANEMMKMVADITEILGXFNISEFIWFLKRFNLQGHNKRLKEVHDKFDTRLNRLIKEHEEERRKRKEMXGSGTHQSKDILDVLLDIYEDKSSEMKLTKENIKAFILDIFLAGTDTSALTLDWAIAELINNPHVMEKARQEIDAVVGKSRIVEESDVMNLPHLQAIVKETLRLHPVVPMIFRESSRRDIVGGYDIPAKSKVFINIWAIGRDPNHWENPLEFRPERFIGEDNDQMDVRGQHYHLIPFGSGRRVCPGTSLALQVLHVNLGAVIQCFELKVEGGNGTIDMAEKPGMTMRRAQPLICVPLPRLNPFPSIFELCGKTMVTVNLGMLHYVLDHVYGAFMHRTKISTPFFSRGWGGTKLDMLEKMIRQLFPDLAGQNWPPTLIQPVWRTIWETKTACXREGVFRTPCEEQLLAALPPESHLARVAFLMPKSVPPHRMACVVHLAGTGDHTFERRLRLGGPLVKENIATMVLESPFYGQRRPLLQRGAKLLCVSDLLLLGRTTIEEARSLLYWLDSEAGFGKMGVCGLSMGGVHAAMVGSLHPTPIATLPFLSPHSAVVAFCEGILKHGTAWEALREDLAAQKAAMTLEEVRERMRNVLSLTDVTRFPIPKNPNAVILVAATDDGYIPKHSVLQLQKAWPGSEVRWVTGGHVSSFLLHNGEFRRAIVDGLDRLPWKESPLHKRGRTSSHCGHDIQL

Location information (JBrowse)

Scaffold	Start	End	Strand
Scaffold00206	223264	245075	+

Gene family

Gene family	subfamily
Cytochrome P450 Family	CYP712A1

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID
--	--	--	--	--

Gene Ontology

biological_process
GO:0055114 oxidation-reduction process

molecular_function

GO:0005506 iron ion binding

GO:0016705 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen

GO:0020037 heme binding

Pfam domain

Protein	Pfam accession	Pfam name	Alignment start	Alignment end	E-value
Glyur000206s00012598.1	PF00067.17	p450	45	497	1.30E-92
Glyur000206s00012598.1	PF00067.17	p450	536	985	1.50E-100
Glyur000206s00012598.1	PF00067.17	p450	1069	1536	6.30E-102
Glyur000206s00012598.1	PF09752.4	DUF2048	1585	1909	2.30E-109

Expression pattern

SRP053019

SRA Experiment	Description	TPM
SRR1783599	control	3.207
SRR1783600	control	3.170
SRR1783602	moderate drought stress	4.400
SRR1811619	moderate drought stress	4.324

DRP000996

SRA Experiment	Description	TPM
DRR006519	Root Summer glycyrrhizin high producing strain	23.556
DRR006520	Root Summer glycyrrhizin high producing strain	23.216
DRR006521	Root Winter glycyrrhizin high producing strain	24.616
DRR006522	Root Winter glycyrrhizin high producing strain	23.795
DRR006523	Root Summer glycyrrhizin low producing strain	31.307
DRR006524	Root Summer glycyrrhizin low producing strain	31.836
DRR006525	Leaf Summer glycyrrhizin high producing strain	10.303
DRR006526	Leaf Summer glycyrrhizin high producing strain	10.199

SRP065514

SRA Experiment	Description	TPM
SRR2867873	Salt Stress (root)	28.241
SRR2868004	Drought Stress (root)	32.124
SRR2967015	Control (root)	29.381

SRP215420

SRA Experiment	Description	TPM
SRR9715738	Leaf	8.539
SRR9715740	Leaf	14.073
SRR9715741	Leaf	15.789
SRR9715739	Root	4.437
SRR9715742	Root	7.727
SRR9715743	Root	6.666

SRP188776

SRA Experiment	Description	TPM
SRR8749027	MeJA induced 9h	7.027
SRR8749028	MeJA induced 9h	22.467
SRR8749029	MeJA induced 9h	11.673
SRR8749030	Uninduced	9.947
SRR8749031	Uninduced	9.196
SRR8749032	Uninduced	9.161

SRP175571

SRA Experiment	Description	TPM
SRR8400026	NaCl treatment - Root	9.726
SRR8400027	Control - Root	8.787