Gene detail information of Glyur000206s00012597 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT2G42260.1 | 2.00E-26 | uv-b-insensitive 4 |
| NR | XP_004493551.1 | 4.17E-75 | PREDICTED: uncharacterized protein LOC101497267 [Cicer arietinum] |
| Swissprot | tr|O48533|PYM_ARATH | 9.00E-45 | Protein POLYCHOME |
| trEMBL | tr|G7KUG0|G7KUG0_MEDTR | 3.00E-66 | UV-B-insensitive protein, putative {ECO:0000313|EMBL:AES81420.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00206 | 213557 | 215051 | + |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| -- | -- | -- | -- | -- | -- |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 4.472 |
| SRR1783600 | control | 4.204 |
| SRR1783602 | moderate drought stress | 2.650 |
| SRR1811619 | moderate drought stress | 2.490 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 5.991 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 5.782 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 0.090 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 0.089 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 0.363 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 0.335 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 0.820 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 0.728 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 11.057 |
| SRR2868004 | Drought Stress (root) | 4.818 |
| SRR2967015 | Control (root) | 4.635 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 4.138 |
| SRR9715740 | Leaf | 0.027 |
| SRR9715741 | Leaf | 0.960 |
| SRR9715739 | Root | 2.405 |
| SRR9715742 | Root | 1.776 |
| SRR9715743 | Root | 2.378 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 16.311 |
| SRR8749028 | MeJA induced 9h | 5.749 |
| SRR8749029 | MeJA induced 9h | 7.347 |
| SRR8749030 | Uninduced | 0.860 |
| SRR8749031 | Uninduced | 2.843 |
| SRR8749032 | Uninduced | 2.889 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 10.981 |
| SRR8400027 | Control - Root | 8.589 |