Gene detail information of Glyur000206s00012589 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT2G42320.2 | 0 | nucleolar protein gar2-related |
| NR | XP_006576839.1 | 0 | PREDICTED: uncharacterized protein LOC100777738 isoform X1 [Glycine max] |
| trEMBL | tr|V7CYA0|V7CYA0_PHAVU | 0 | Uncharacterized protein {ECO:0000313|EMBL:ESW34255.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00206 | 158021 | 164876 | - |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| -- | -- | -- | -- | -- | -- |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 31.974 |
| SRR1783600 | control | 32.359 |
| SRR1783602 | moderate drought stress | 35.415 |
| SRR1811619 | moderate drought stress | 35.462 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 9.349 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 9.216 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 6.557 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 6.232 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 8.261 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 8.298 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 15.295 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 15.182 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 57.113 |
| SRR2868004 | Drought Stress (root) | 43.979 |
| SRR2967015 | Control (root) | 38.732 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 27.204 |
| SRR9715740 | Leaf | 17.503 |
| SRR9715741 | Leaf | 21.279 |
| SRR9715739 | Root | 3.231 |
| SRR9715742 | Root | 19.887 |
| SRR9715743 | Root | 18.009 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 38.807 |
| SRR8749028 | MeJA induced 9h | 40.836 |
| SRR8749029 | MeJA induced 9h | 24.514 |
| SRR8749030 | Uninduced | 4.409 |
| SRR8749031 | Uninduced | 2.051 |
| SRR8749032 | Uninduced | 3.439 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 46.351 |
| SRR8400027 | Control - Root | 54.861 |