Gene detail information of Glyur000206s00012573 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT3G52110.2 | 5.00E-22 | |
| NR | XP_003521189.1 | 9.88E-97 | PREDICTED: uncharacterized protein LOC100812148 [Glycine max] |
| trEMBL | tr|I1JNF4|I1JNF4_SOYBN | 4.00E-97 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA03G29590.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00206 | 56334 | 57696 | - |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| -- | -- | -- | -- | -- | -- |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 2.700 |
| SRR1783600 | control | 2.693 |
| SRR1783602 | moderate drought stress | 2.303 |
| SRR1811619 | moderate drought stress | 2.423 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 5.449 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 5.709 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 0.309 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 0.201 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 2.246 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 2.243 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 3.950 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 4.159 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 17.997 |
| SRR2868004 | Drought Stress (root) | 6.885 |
| SRR2967015 | Control (root) | 7.279 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 0.860 |
| SRR9715740 | Leaf | 0.488 |
| SRR9715741 | Leaf | 1.231 |
| SRR9715739 | Root | 0.408 |
| SRR9715742 | Root | 1.134 |
| SRR9715743 | Root | 0.696 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 32.112 |
| SRR8749028 | MeJA induced 9h | 13.579 |
| SRR8749029 | MeJA induced 9h | 21.600 |
| SRR8749030 | Uninduced | 0.340 |
| SRR8749031 | Uninduced | 1.204 |
| SRR8749032 | Uninduced | 1.333 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 15.647 |
| SRR8400027 | Control - Root | 12.200 |