Gene detail information of Glyur000206s00012570.1 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT3G57600.1 | 5.00E-59 | Integrase-type DNA-binding superfamily protein |
| NR | XP_004493523.1 | 3.21E-165 | PREDICTED: dehydration-responsive element-binding protein 2F-like [Cicer arietinum] |
| Swissprot | tr|Q9SVX5|DRE2F_ARATH | 3.00E-83 | Dehydration-responsive element-binding protein 2F |
| trEMBL | tr|I1N929|I1N929_SOYBN | 2.00E-159 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA19G32380.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00206 | 38863 | 39720 | + |
Gene family
| Gene family | subfamily |
|---|---|
| Transcription Factors Family | ERF |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
|
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur000206s00012570.1 | PF00847.15 | AP2 | 29 | 78 | 5.20E-17 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 0.172 |
| SRR1783600 | control | 0.186 |
| SRR1783602 | moderate drought stress | 0.035 |
| SRR1811619 | moderate drought stress | 0.000 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 0.126 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 0.000 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 0.416 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 0.605 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 0.000 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 0.112 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 0.423 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 0.684 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 0.340 |
| SRR2868004 | Drought Stress (root) | 0.504 |
| SRR2967015 | Control (root) | 0.500 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 0.650 |
| SRR9715740 | Leaf | 0.427 |
| SRR9715741 | Leaf | 0.692 |
| SRR9715739 | Root | 0.272 |
| SRR9715742 | Root | 0.222 |
| SRR9715743 | Root | 0.214 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 0.493 |
| SRR8749028 | MeJA induced 9h | 0.117 |
| SRR8749029 | MeJA induced 9h | 0.637 |
| SRR8749030 | Uninduced | 0.000 |
| SRR8749031 | Uninduced | 0.089 |
| SRR8749032 | Uninduced | 0.330 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 0.171 |
| SRR8400027 | Control - Root | 0.185 |