Gene detail information of Glyur000205s00012960 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT5G61770.3 | 8.00E-132 | PETER PAN-like protein |
| NR | XP_003540635.1 | 0 | PREDICTED: peter Pan-like protein-like [Glycine max] |
| Swissprot | tr|Q9ASU7|PPAN_ARATH | 9.00E-164 | Peter Pan-like protein |
| trEMBL | tr|I1LPJ3|I1LPJ3_SOYBN | 0 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA12G03000.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00205 | 228764 | 233071 | - |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur000205s00012960.1 | PF04427.13 | Brix | 39 | 289 | 8.30E-49 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 15.297 |
| SRR1783600 | control | 15.743 |
| SRR1783602 | moderate drought stress | 14.421 |
| SRR1811619 | moderate drought stress | 14.360 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 30.591 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 30.193 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 51.601 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 49.972 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 23.123 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 22.990 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 16.011 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 15.635 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 43.355 |
| SRR2868004 | Drought Stress (root) | 39.551 |
| SRR2967015 | Control (root) | 36.356 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 26.771 |
| SRR9715740 | Leaf | 35.206 |
| SRR9715741 | Leaf | 32.148 |
| SRR9715739 | Root | 2.724 |
| SRR9715742 | Root | 17.603 |
| SRR9715743 | Root | 13.616 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 107.088 |
| SRR8749028 | MeJA induced 9h | 62.266 |
| SRR8749029 | MeJA induced 9h | 71.315 |
| SRR8749030 | Uninduced | 36.926 |
| SRR8749031 | Uninduced | 23.638 |
| SRR8749032 | Uninduced | 30.884 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 32.937 |
| SRR8400027 | Control - Root | 28.706 |