Gene detail

Gene detail information of Glyur000205s00012954

Functional Annotation

Database	Orthologs	E value	Annotation
TAIR	AT1G17330.1	2.00E-76	Metal-dependent phosphohydrolase
NR	XP_007131625.1	4.95E-143	hypothetical protein PHAVU_011G028900g [Phaseolus vulgaris]
COG	YP_007671889.1	2.00E-52	HD superfamily phosphohydrolase [Polaribacter sp. MED152]
trEMBL	tr\|V7ADP0\|V7ADP0_PHAVU	2.00E-143	Uncharacterized protein {ECO:0000313\|EMBL:ESW03619.1}

Sequence

Transcript Sequence

>Glyur000205s00012954.1
TGCAAAGATAGTAGTCAAGTGAGTGAGTGAGAGTGAGAGAGAGAGAGAGAGAGGAGGAAGGTGATGGAGAGGGTCAGGGAAGAGAGGGTGAGAAAAGCAGAGGCGCTGGTGGAGATGGCCATGAAAGGGAACGACGCTTCTCACGACGCGGCACATGTTTGGAGGGTTCGTGACCTCGCTCTCTCCCTTGCCTCCGAGGAAGGCCTCTCTTCTNATCCTCACTCCATGGAAATTGTAGAACTTGCTGCACTGCTCCATGATATAGGTGACTACAAATACCTGAGGGATCCATCTGAGGAAAAAACTGTTGAGAATTTTCTCGAGGAAGAGGGAGTTGAGGAGCACAAGAAATCAAAAATTTTGAAGATCATCAGAGGAATGGGTTTCAAAGAGGAGGTGACAGGAAACGGGAATAGTGAATGGTTTCCAGAATTTGGGGTTGTGCAAGATGCAGATCGACTTGATGCTATTGGTGCTATAGGAATTGCACGTTGCTTCACCTTTGGCGGGAGTAGGAAGAGGGCNCTGCATGATCCTGCCATTTTACCACGGTCTAATTTGTCCAAGGAGCAATACATGAACAAAGAGGAACAAACTACAATCAATCATTTTCATGAGAAGCTTCTCAAGCTCAAAGATATGATGAAAACCAAGGCTGGNCAGAGGAGGGCTGAGAAAAGGCACAAGTTCATGGAGGAGTTTGTGAAAGAGTTCTATGACGAATGGAATGGTTTAAGCTAAGAAAGTACCTGTTCTAGGCTTTATACAATTTTACACTTAACAGTATTGCATTAATACTTGTCATAGTGGAGCATGCCTAAGCCAATTCAAGATGNTGGGAATTGTTCACATCTTGCAAGTTGCATGTCAGTAACCAATTCATGCTTCATGCTCCAAGCATGGTTTTCTCCTCCAGACTGTATAATGTGAACTTGATGTCTTGTTACCTATTATTTCTTTTCCACCTCATTCGTCGGGGACACTGTGTGGATGAAGTATTATCATTAAATAGATTAAA

Protein Sequence

Location information (JBrowse)

Scaffold	Start	End	Strand
Scaffold00205	197168	199884	-

Gene family

Gene family	subfamily
--	--

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID
--	--	--	--	--

Gene Ontology

Not hits found.

Not hits found.

Pfam domain

Protein	Pfam accession	Pfam name	Alignment start	Alignment end	E-value
Glyur000205s00012954.1	PF01966.17	HD	30	135	1.60E-07

Expression pattern

SRP053019

SRA Experiment	Description	TPM
SRR1783599	control	26.594
SRR1783600	control	27.155
SRR1783602	moderate drought stress	41.348
SRR1811619	moderate drought stress	41.155

DRP000996

SRA Experiment	Description	TPM
DRR006519	Root Summer glycyrrhizin high producing strain	61.132
DRR006520	Root Summer glycyrrhizin high producing strain	60.684
DRR006521	Root Winter glycyrrhizin high producing strain	32.686
DRR006522	Root Winter glycyrrhizin high producing strain	32.545
DRR006523	Root Summer glycyrrhizin low producing strain	65.558
DRR006524	Root Summer glycyrrhizin low producing strain	64.652
DRR006525	Leaf Summer glycyrrhizin high producing strain	19.374
DRR006526	Leaf Summer glycyrrhizin high producing strain	19.268

SRP065514

SRA Experiment	Description	TPM
SRR2867873	Salt Stress (root)	21.743
SRR2868004	Drought Stress (root)	27.182
SRR2967015	Control (root)	28.894

SRP215420

SRA Experiment	Description	TPM
SRR9715738	Leaf	25.157
SRR9715740	Leaf	24.876
SRR9715741	Leaf	28.266
SRR9715739	Root	14.132
SRR9715742	Root	24.165
SRR9715743	Root	18.046

SRP188776

SRA Experiment	Description	TPM
SRR8749027	MeJA induced 9h	85.557
SRR8749028	MeJA induced 9h	43.811
SRR8749029	MeJA induced 9h	67.092
SRR8749030	Uninduced	22.973
SRR8749031	Uninduced	10.333
SRR8749032	Uninduced	18.476

SRP175571

SRA Experiment	Description	TPM
SRR8400026	NaCl treatment - Root	44.510
SRR8400027	Control - Root	55.587