Gene detail information of Glyur000205s00012951 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT5G23200.1 | 7.00E-99 | |
| NR | XP_004505706.1 | 0 | PREDICTED: SET domain-containing protein 9-like isoform X1 [Cicer arietinum] |
| trEMBL | tr|I1LIR8|I1LIR8_SOYBN | 3.00E-180 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA11G10630.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00205 | 175142 | 179018 | - |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| -- | -- | -- | -- | -- | -- |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 2.187 |
| SRR1783600 | control | 2.083 |
| SRR1783602 | moderate drought stress | 2.358 |
| SRR1811619 | moderate drought stress | 2.538 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 3.698 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 3.579 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 4.468 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 4.363 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 2.912 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 2.808 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 2.807 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 2.935 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 7.063 |
| SRR2868004 | Drought Stress (root) | 6.950 |
| SRR2967015 | Control (root) | 8.026 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 4.500 |
| SRR9715740 | Leaf | 6.966 |
| SRR9715741 | Leaf | 5.436 |
| SRR9715739 | Root | 1.332 |
| SRR9715742 | Root | 1.705 |
| SRR9715743 | Root | 1.384 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 8.628 |
| SRR8749028 | MeJA induced 9h | 9.625 |
| SRR8749029 | MeJA induced 9h | 4.756 |
| SRR8749030 | Uninduced | 3.215 |
| SRR8749031 | Uninduced | 1.508 |
| SRR8749032 | Uninduced | 2.412 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 7.137 |
| SRR8400027 | Control - Root | 7.239 |