Gene detail

Gene detail information of Glyur000205s00012934

Functional Annotation

Database	Orthologs	E value	Annotation
TAIR	AT4G38770.1	6.00E-35	proline-rich protein 4
NR	KEH30585.1	1.62E-127	pollen protein Ole E I-like protein [Medicago truncatula]
Swissprot	tr\|Q9SKP9\|PRP2_ARATH	9.00E-38	Proline-rich protein 2 (Precursor)
trEMBL	tr\|A0A072UXI7\|A0A072UXI7_MEDTR	6.00E-128	Pollen protein Ole E I-like protein {ECO:0000313\|EMBL:KEH30585.1}

Sequence

Transcript Sequence

>Glyur000205s00012934.1
TGAGAAGTGAGAACTACTGCATTGAATGAAAGATAATGCCATTTGTTCATGAAATGGCTGGTGTGTGCACGTTGATGTCTTTCATTTCATCCTACTAGCTCGTATTATTATTAGCTAGGGACCCTTTACACCATGTGAGGTTCTTAATTTCAGTGTCGGCGNTGAGCCTTTGGAGTTAATATCCAATTCCTAGCTTTGTTTATATATTTAGCCACATCTCAAATAGTAACAATATCAAAGCATAGAAGCTTAATAGCTTCTCATCAGTACGTACTTCTCATAGCTGTCTGCAGCTTATTCTAGCTCCTTTTTATTTTGTTCTGTTGAACATATCATTAGGAAACTGTGATTATTGCAGTTTCCCTATATATTATGCAGATTTTCAGCCGCAGCCAAGGAGCACTTGTGTGCTTTTGGTTGTCTGTGCTTTTTGTGGTACTAGCAGGGTTTTGCTATGGAGACCATAGTACGGTTGAGGTAGTTGGGCTGGGAGAATGCGCAGACTGCAAGGAGAACAATATTAAGACTAGCCAGGCCTTCTCAGGGATACATGTAACAATAGATTGCAAGGCCGCAAATGGACATTTCAAAACAAGAGGGGTAGGTGAGCTTGATAAAAATGGGAACTTCAAAGTATCCCTTCCTCAAGACATTGTAAAAGATGGTGAATTGAAAGAGGAATGCTATGCTCAGCTACATAGTGCATCAGCTGCACCTTGCCCTGCCCATGATGGCCTACAAAACACCAAAATTGTCATCAAGTCAAAATCTGATGACAACAAACACACNCTCAGTCCTACTAATGGAAAACTCAAATTCTCATCAGCAACATGCACTTCAGCATTCTTTTGGCCTTTCTTCAAACATCCACCTTTGCCTAAGCTTTCTCATCATCTTTTCCCTCCTAAAGTCTTTCCACCATTTCCACCAAAGTATTTCCCTAAGCACCCTCTCTTTCCTCCTGTACCTATCTACAAGAAACCCCTCCCTCCTTTGCCTCCTAAAGTCTTCCCACCATTCCCACCAAAGNATTTCCCTAAGCACCCTCTCTTTCCTCCTGTACCTATCTACAAGAAACCCCTCCCTCCCCCTNTGCCTGTATATGATAAACCTCTCCCTCCTCCTGTGCCTAACTATGAGCCACCTCTCCCTCCTCCAGTTCCAATAAAGCCACTTCCACCACCAGTTCCAGTGAAGAAACCATGTCCACCACCAAAGGTTGAAAAACCTCTACCTCCACCAGTTCCAAAGCCAATTCCACCACCAGTCCCAGTGAAGAAACCATGTCCACCACCAAAGGTTGAGAAACCTCTACCCCCACCAATTCCAAAGCCACTTCCACCACCAGTTCCAGTGAAGAAGCCATGCCCACCTAAGGTTAAACCTTTACCCCCACCAATTCCAAAGCCAATTCCACCACCAGTTCCAGTAAAGAAGCCATGTCCACCACCAAAGGTTGAGAAACCTCTACCCCCACCAATTCCAAAGCCACATCCACCACCAGTTCCAGTCAAAAAGCCATGCCCACCACCAAAGGTTGAGAAGCCTCTGCCCCCACCAGTTCCAAAGCCACTTCCACCACCAAAGGTTGAGAAACCTCTACCTCCACCAGTTCCAAAGCCAGTTCCACCACCAGTTCCAGTCATCAAGAAGCCATGCCCACCAAAGATTAGTCATCCACTTCTACCACCGGTTCCAATCTTCAAGAAGCCATACCCACCTTCTATTCCAATTTACAAGCCTCCACTTCTTCCTCCTCCTGTTCCAATTTACAAACCTCTCCCTCCTTTCCCAAAGTTGCCTCCATTCAAGACCCCTCCAAAGCATTTCCCAAAGTTGCCTCCATTCAAGATCCCTCCAAAGCATTTGTTCCATCACCCTAAGTTTGGAAATTGGCCTCCACTACCTCCAAAGCACTTTTTCCATCACCCCAAGTTTGGGAAATGGCCTCCACTAGCACCTTTTAGTCCTCATCATCCTTAGGCTATATGGCAGAGCTAGATATTCATATATATATATATATATATGGCTCATTTGGGTTTACAAAATATATGTGCATTTGCATGTATTCTGTCTTCTGATTTGTATTATTGCTTTCCTATCATCAAGGATTTAGGGAAATTTGTATTGTAGCAAATAAAGCCTTTAAGGGTAGGGCATGTGAACAAAAAGAGCATCAANTGAGAATGGATAAAACAAAAATAGAGTGATGTTGCTTGAAGTTTGAGGAAGTTGAGTGTGATCAATTGTTGTTCTTGAGTGAAGATCACGGGAATTTTTTTTAAA

Protein Sequence

Location information (JBrowse)

Scaffold	Start	End	Strand
Scaffold00205	73606	76796	+

Gene family

Gene family	subfamily
--	--

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID
--	--	--	--	--

Gene Ontology

Not hits found.

Not hits found.

Pfam domain

Protein	Pfam accession	Pfam name	Alignment start	Alignment end	E-value
Glyur000205s00012934.1	PF01190.12	Pollen_Ole_e_I	36	121	2.30E-16

Expression pattern

SRP053019

SRA Experiment	Description	TPM
SRR1783599	control	0.016
SRR1783600	control	0.016
SRR1783602	moderate drought stress	0.033
SRR1811619	moderate drought stress	0.033

DRP000996

SRA Experiment	Description	TPM
DRR006519	Root Summer glycyrrhizin high producing strain	0.000
DRR006520	Root Summer glycyrrhizin high producing strain	0.000
DRR006521	Root Winter glycyrrhizin high producing strain	0.439
DRR006522	Root Winter glycyrrhizin high producing strain	0.381
DRR006523	Root Summer glycyrrhizin low producing strain	0.046
DRR006524	Root Summer glycyrrhizin low producing strain	0.048
DRR006525	Leaf Summer glycyrrhizin high producing strain	239.811
DRR006526	Leaf Summer glycyrrhizin high producing strain	235.528

SRP065514

SRA Experiment	Description	TPM
SRR2867873	Salt Stress (root)	0.019
SRR2868004	Drought Stress (root)	0.042
SRR2967015	Control (root)	0.072

SRP215420

SRA Experiment	Description	TPM
SRR9715738	Leaf	66.523
SRR9715740	Leaf	8.386
SRR9715741	Leaf	9.187
SRR9715739	Root	0.021
SRR9715742	Root	0.688
SRR9715743	Root	0.487

SRP188776

SRA Experiment	Description	TPM
SRR8749027	MeJA induced 9h	0.000
SRR8749028	MeJA induced 9h	0.000
SRR8749029	MeJA induced 9h	0.000
SRR8749030	Uninduced	0.000
SRR8749031	Uninduced	0.000
SRR8749032	Uninduced	0.000

SRP175571

SRA Experiment	Description	TPM
SRR8400026	NaCl treatment - Root	0.015
SRR8400027	Control - Root	0.762