Gene detail information of Glyur000205s00012926 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT2G21180.1 | 9.00E-21 | |
| NR | NP_001240932.1 | 3.57E-62 | uncharacterized protein LOC100813444 [Glycine max] |
| trEMBL | tr|C6TCC8|C6TCC8_SOYBN | 1.00E-62 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA12G02720.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00205 | 46718 | 47107 | + |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| -- | -- | -- | -- | -- | -- |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 154.314 |
| SRR1783600 | control | 155.131 |
| SRR1783602 | moderate drought stress | 255.848 |
| SRR1811619 | moderate drought stress | 254.608 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 328.693 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 329.402 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 3976.354 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 3811.025 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 373.199 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 372.416 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 5.006 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 5.227 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 8.197 |
| SRR2868004 | Drought Stress (root) | 12.983 |
| SRR2967015 | Control (root) | 32.159 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 2.963 |
| SRR9715740 | Leaf | 6.175 |
| SRR9715741 | Leaf | 6.612 |
| SRR9715739 | Root | 88.813 |
| SRR9715742 | Root | 59.955 |
| SRR9715743 | Root | 64.185 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 1.079 |
| SRR8749028 | MeJA induced 9h | 4.717 |
| SRR8749029 | MeJA induced 9h | 1.435 |
| SRR8749030 | Uninduced | 1.670 |
| SRR8749031 | Uninduced | 0.925 |
| SRR8749032 | Uninduced | 1.021 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 42.235 |
| SRR8400027 | Control - Root | 26.585 |