Gene detail information of Glyur000205s00012925 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| NR | NP_001236295.1 | 5.66E-11 | uncharacterized protein LOC100306014 [Glycine max] |
| trEMBL | tr|C6SXL1|C6SXL1_SOYBN | 2.00E-11 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA12G02705.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00205 | 44987 | 45596 | + |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| -- | -- | -- | -- | -- | -- |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 105.302 |
| SRR1783600 | control | 105.807 |
| SRR1783602 | moderate drought stress | 66.098 |
| SRR1811619 | moderate drought stress | 71.225 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 101.333 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 103.906 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 94.642 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 96.975 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 70.251 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 66.273 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 20.420 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 17.450 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 46.019 |
| SRR2868004 | Drought Stress (root) | 54.347 |
| SRR2967015 | Control (root) | 74.672 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 24.449 |
| SRR9715740 | Leaf | 13.515 |
| SRR9715741 | Leaf | 11.526 |
| SRR9715739 | Root | 31.627 |
| SRR9715742 | Root | 51.174 |
| SRR9715743 | Root | 46.317 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 36.133 |
| SRR8749028 | MeJA induced 9h | 44.819 |
| SRR8749029 | MeJA induced 9h | 30.661 |
| SRR8749030 | Uninduced | 9.163 |
| SRR8749031 | Uninduced | 8.093 |
| SRR8749032 | Uninduced | 15.553 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 63.435 |
| SRR8400027 | Control - Root | 55.336 |