Gene detail information of Glyur000205s00012924 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT4G30150.1 | 0 | |
| NR | XP_004505684.1 | 0 | PREDICTED: uncharacterized protein LOC101490411 isoform X1 [Cicer arietinum] |
| trEMBL | tr|A0A072UNF5|A0A072UNF5_MEDTR | 0 | Urb2/Npa2 family protein {ECO:0000313|EMBL:KEH30593.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00205 | 33956 | 44159 | + |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur000205s00012924.1 | PF10441.4 | Urb2 | 1773 | 2015 | 9.40E-31 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 4.463 |
| SRR1783600 | control | 4.503 |
| SRR1783602 | moderate drought stress | 5.119 |
| SRR1811619 | moderate drought stress | 5.005 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 2.831 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 2.964 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 2.369 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 2.352 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 3.426 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 3.602 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 1.204 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 1.180 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 4.192 |
| SRR2868004 | Drought Stress (root) | 3.699 |
| SRR2967015 | Control (root) | 3.674 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 1.121 |
| SRR9715740 | Leaf | 2.320 |
| SRR9715741 | Leaf | 1.164 |
| SRR9715739 | Root | 0.393 |
| SRR9715742 | Root | 5.834 |
| SRR9715743 | Root | 5.110 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 7.940 |
| SRR8749028 | MeJA induced 9h | 6.337 |
| SRR8749029 | MeJA induced 9h | 5.065 |
| SRR8749030 | Uninduced | 0.648 |
| SRR8749031 | Uninduced | 0.694 |
| SRR8749032 | Uninduced | 1.196 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 6.988 |
| SRR8400027 | Control - Root | 6.747 |