Gene detail information of Glyur000205s00012916 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT3G53420.2 | 3.00E-14 | plasma membrane intrinsic protein 2A |
| NR | KHN32315.1 | 6.26E-141 | Putative aquaporin PIP2-6 [Glycine soja] |
| COG | YP_007100376.1 | 1.00E-17 | MIP family channel protein [Chroococcidiopsis thermalis PCC 7203] |
| Swissprot | tr|Q9ATL5|TIP42_MAIZE | 1.00E-21 | Aquaporin TIP4-2 |
| trEMBL | tr|I1LPG0|I1LPG0_SOYBN | 3.00E-138 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA12G02640.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00205 | 31 | 735 | - |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
|
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur000205s00012916.1 | PF00230.15 | MIP | 23 | 201 | 1.00E-26 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 0.819 |
| SRR1783600 | control | 0.889 |
| SRR1783602 | moderate drought stress | 2.108 |
| SRR1811619 | moderate drought stress | 2.100 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 4.664 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 4.193 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 0.222 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 0.309 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 2.446 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 2.258 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 3.883 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 3.881 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 0.431 |
| SRR2868004 | Drought Stress (root) | 1.004 |
| SRR2967015 | Control (root) | 2.465 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 19.683 |
| SRR9715740 | Leaf | 28.513 |
| SRR9715741 | Leaf | 32.902 |
| SRR9715739 | Root | 0.070 |
| SRR9715742 | Root | 2.770 |
| SRR9715743 | Root | 2.743 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 0.000 |
| SRR8749028 | MeJA induced 9h | 0.000 |
| SRR8749029 | MeJA induced 9h | 0.000 |
| SRR8749030 | Uninduced | 0.000 |
| SRR8749031 | Uninduced | 0.000 |
| SRR8749032 | Uninduced | 0.000 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 2.260 |
| SRR8400027 | Control - Root | 3.155 |