Gene detail information of Glyur000204s00012423 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT5G62550.1 | 2.00E-36 | |
| NR | XP_004508766.1 | 1.65E-162 | PREDICTED: micronuclear linker histone polyprotein-like [Cicer arietinum] |
| trEMBL | tr|I1JZR2|I1JZR2_SOYBN | 2.00E-155 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA05G01250.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00204 | 232612 | 235491 | - |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| -- | -- | -- | -- | -- | -- |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 8.324 |
| SRR1783600 | control | 8.542 |
| SRR1783602 | moderate drought stress | 4.317 |
| SRR1811619 | moderate drought stress | 4.539 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 10.454 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 10.273 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 0.143 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 0.151 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 12.649 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 13.070 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 2.028 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 1.885 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 26.244 |
| SRR2868004 | Drought Stress (root) | 8.868 |
| SRR2967015 | Control (root) | 13.715 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 7.248 |
| SRR9715740 | Leaf | 1.205 |
| SRR9715741 | Leaf | 3.879 |
| SRR9715739 | Root | 3.532 |
| SRR9715742 | Root | 6.404 |
| SRR9715743 | Root | 4.148 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 18.446 |
| SRR8749028 | MeJA induced 9h | 14.574 |
| SRR8749029 | MeJA induced 9h | 11.775 |
| SRR8749030 | Uninduced | 2.934 |
| SRR8749031 | Uninduced | 2.104 |
| SRR8749032 | Uninduced | 1.607 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 26.546 |
| SRR8400027 | Control - Root | 22.217 |