Gene detail information of Glyur000204s00012418 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT5G62760.3 | 5.00E-125 | P-loop containing nucleoside triphosphate hydrolases superfamily protein |
| NR | XP_006600676.1 | 0 | PREDICTED: formin-like protein 3-like isoform X1 [Glycine max] |
| trEMBL | tr|I1MTQ6|I1MTQ6_SOYBN | 0 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA17G10570.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00204 | 196629 | 204189 | - |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
|
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur000204s00012418.1 | PF13671.1 | AAA_33 | 341 | 477 | 1.50E-06 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 39.266 |
| SRR1783600 | control | 39.266 |
| SRR1783602 | moderate drought stress | 71.699 |
| SRR1811619 | moderate drought stress | 71.377 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 32.360 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 31.687 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 34.265 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 33.630 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 29.338 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 29.234 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 21.510 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 21.499 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 47.668 |
| SRR2868004 | Drought Stress (root) | 54.638 |
| SRR2967015 | Control (root) | 58.531 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 17.643 |
| SRR9715740 | Leaf | 16.995 |
| SRR9715741 | Leaf | 23.563 |
| SRR9715739 | Root | 5.717 |
| SRR9715742 | Root | 20.536 |
| SRR9715743 | Root | 16.547 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 22.710 |
| SRR8749028 | MeJA induced 9h | 34.954 |
| SRR8749029 | MeJA induced 9h | 17.311 |
| SRR8749030 | Uninduced | 28.343 |
| SRR8749031 | Uninduced | 22.807 |
| SRR8749032 | Uninduced | 17.836 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 56.390 |
| SRR8400027 | Control - Root | 55.881 |