Gene detail information of Glyur000203s00012902 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT2G21530.1 | 3.00E-42 | SMAD/FHA domain-containing protein |
| NR | XP_004502003.1 | 8.47E-122 | PREDICTED: probable serine/threonine-protein kinase DDB_G0280133-like isoform X1 [Cicer arietinum] |
| COG | YP_004917388.1 | 1.00E-07 | hypothetical protein MEALZ_2110 [Methylomicrobium alcaliphilum 20Z] |
| trEMBL | tr|C6TF55|C6TF55_SOYBN | 1.00E-112 | Putative uncharacterized protein {ECO:0000313|EMBL:ACU20457.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00203 | 207386 | 210516 | - |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
|
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur000203s00012902.1 | PF00498.21 | FHA | 119 | 186 | 7.50E-14 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 5.262 |
| SRR1783600 | control | 5.342 |
| SRR1783602 | moderate drought stress | 4.212 |
| SRR1811619 | moderate drought stress | 4.118 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 3.301 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 3.266 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 0.876 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 0.909 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 2.624 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 1.333 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 108.472 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 107.340 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 4.785 |
| SRR2868004 | Drought Stress (root) | 5.590 |
| SRR2967015 | Control (root) | 2.691 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 67.710 |
| SRR9715740 | Leaf | 85.522 |
| SRR9715741 | Leaf | 63.944 |
| SRR9715739 | Root | 0.572 |
| SRR9715742 | Root | 1.491 |
| SRR9715743 | Root | 2.218 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 0.751 |
| SRR8749028 | MeJA induced 9h | 1.990 |
| SRR8749029 | MeJA induced 9h | 0.835 |
| SRR8749030 | Uninduced | 0.260 |
| SRR8749031 | Uninduced | 1.881 |
| SRR8749032 | Uninduced | 2.049 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 9.268 |
| SRR8400027 | Control - Root | 9.476 |