Gene detail information of Glyur000203s00012886.2 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT2G27110.2 | 0 | FAR1-related sequence 3 |
| NR | XP_004501994.1 | 0 | PREDICTED: protein FAR1-RELATED SEQUENCE 3-like isoform X1 [Cicer arietinum] |
| Swissprot | tr|Q9ZVC9|FRS3_ARATH | 0 | Protein FAR1-RELATED SEQUENCE 3 |
| trEMBL | tr|I1NE48|I1NE48_SOYBN | 0 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA20G11710.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00203 | 71490 | 76420 | + |
Gene family
| Gene family | subfamily |
|---|---|
| Transcription Factors Family | FAR1 |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur000203s00012886.2 | PF03101.10 | FAR1 | 71 | 143 | 3.50E-13 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 9.639 |
| SRR1783600 | control | 9.707 |
| SRR1783602 | moderate drought stress | 9.852 |
| SRR1811619 | moderate drought stress | 9.926 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 12.563 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 12.217 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 12.266 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 11.722 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 16.492 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 16.470 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 10.322 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 10.442 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 18.380 |
| SRR2868004 | Drought Stress (root) | 20.424 |
| SRR2967015 | Control (root) | 23.237 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 16.171 |
| SRR9715740 | Leaf | 18.132 |
| SRR9715741 | Leaf | 23.387 |
| SRR9715739 | Root | 1.555 |
| SRR9715742 | Root | 11.795 |
| SRR9715743 | Root | 10.678 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 8.931 |
| SRR8749028 | MeJA induced 9h | 18.203 |
| SRR8749029 | MeJA induced 9h | 7.510 |
| SRR8749030 | Uninduced | 9.323 |
| SRR8749031 | Uninduced | 7.320 |
| SRR8749032 | Uninduced | 6.150 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 16.456 |
| SRR8400027 | Control - Root | 16.471 |