Gene detail information of Glyur000203s00012876 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT2G27130.1 | 3.00E-08 | Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein |
| NR | AFK42140.1 | 1.57E-37 | unknown [Lotus japonicus] |
| Swissprot | tr|Q9ZVC7|XYP11_ARATH | 2.00E-12 | Xylogen-like protein 11 (Precursor) |
| trEMBL | tr|I3SPE8|I3SPE8_LOTJA | 6.00E-38 | Uncharacterized protein {ECO:0000313|EMBL:AFK42140.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00203 | 26263 | 29740 | - |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur000203s00012876.1 | PF14368.1 | LTP_2 | 30 | 88 | 2.00E-05 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 0.221 |
| SRR1783600 | control | 0.105 |
| SRR1783602 | moderate drought stress | 0.397 |
| SRR1811619 | moderate drought stress | 0.618 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 0.194 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 0.197 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 0.000 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 0.000 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 0.214 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 0.135 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 37.512 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 36.870 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 23.500 |
| SRR2868004 | Drought Stress (root) | 12.379 |
| SRR2967015 | Control (root) | 11.887 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 51.416 |
| SRR9715740 | Leaf | 30.231 |
| SRR9715741 | Leaf | 36.661 |
| SRR9715739 | Root | 0.076 |
| SRR9715742 | Root | 0.347 |
| SRR9715743 | Root | 0.192 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 1.030 |
| SRR8749028 | MeJA induced 9h | 2.731 |
| SRR8749029 | MeJA induced 9h | 0.834 |
| SRR8749030 | Uninduced | 0.164 |
| SRR8749031 | Uninduced | 0.000 |
| SRR8749032 | Uninduced | 0.069 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 2.390 |
| SRR8400027 | Control - Root | 3.067 |