Gene detail information of Glyur000202s00015418.1 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT3G16770.1 | 7.00E-28 | ethylene-responsive element binding protein |
| NR | NP_001241446.1 | 7.30E-158 | uncharacterized protein LOC100780763 [Glycine max] |
| Swissprot | tr|P42736|RAP23_ARATH | 3.00E-39 | Ethylene-responsive transcription factor RAP2-3 |
| trEMBL | tr|C6TJ94|C6TJ94_SOYBN | 3.00E-158 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA10G02080.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00202 | 234218 | 236018 | + |
Gene family
| Gene family | subfamily |
|---|---|
| Transcription Factors Family | ERF |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
|
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur000202s00015418.1 | PF00847.15 | AP2 | 76 | 124 | 1.80E-16 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 25.258 |
| SRR1783600 | control | 25.912 |
| SRR1783602 | moderate drought stress | 13.354 |
| SRR1811619 | moderate drought stress | 13.368 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 49.660 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 50.113 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 120.230 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 114.731 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 76.761 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 77.095 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 5.657 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 4.880 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 62.664 |
| SRR2868004 | Drought Stress (root) | 48.294 |
| SRR2967015 | Control (root) | 65.608 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 10.918 |
| SRR9715740 | Leaf | 6.157 |
| SRR9715741 | Leaf | 7.271 |
| SRR9715739 | Root | 133.719 |
| SRR9715742 | Root | 126.496 |
| SRR9715743 | Root | 126.478 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 1075.457 |
| SRR8749028 | MeJA induced 9h | 1065.122 |
| SRR8749029 | MeJA induced 9h | 1338.940 |
| SRR8749030 | Uninduced | 1071.604 |
| SRR8749031 | Uninduced | 860.884 |
| SRR8749032 | Uninduced | 1550.996 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 72.135 |
| SRR8400027 | Control - Root | 116.399 |