Gene detail information of Glyur000202s00015399 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT2G47600.1 | 0 | magnesium/proton exchanger |
| NR | XP_004495946.1 | 0 | PREDICTED: magnesium/proton exchanger-like isoform X1 [Cicer arietinum] |
| COG | YP_001530245.1 | 2.00E-08 | CaCA family Na(+)/Ca(+) antiporter [Desulfococcus oleovorans Hxd3] |
| Swissprot | tr|O22252|MHX_ARATH | 0 | Magnesium/proton exchanger |
| trEMBL | tr|I1L7U8|I1L7U8_SOYBN | 0 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA10G02250.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00202 | 74191 | 79637 | + |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
|
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur000202s00015399.1 | PF01699.19 | Na_Ca_ex | 43 | 203 | 1.40E-25 |
| Glyur000202s00015399.1 | PF01699.19 | Na_Ca_ex | 366 | 519 | 1.50E-17 |
| Glyur000202s00015399.2 | PF01699.19 | Na_Ca_ex | 43 | 203 | 1.40E-25 |
| Glyur000202s00015399.2 | PF01699.19 | Na_Ca_ex | 366 | 519 | 1.50E-17 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 5.845 |
| SRR1783600 | control | 5.867 |
| SRR1783602 | moderate drought stress | 9.035 |
| SRR1811619 | moderate drought stress | 9.251 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 3.938 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 3.442 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 2.555 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 2.693 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 1.486 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 1.422 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 11.063 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 11.227 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 26.297 |
| SRR2868004 | Drought Stress (root) | 15.271 |
| SRR2967015 | Control (root) | 24.178 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 36.408 |
| SRR9715740 | Leaf | 26.095 |
| SRR9715741 | Leaf | 27.739 |
| SRR9715739 | Root | 6.241 |
| SRR9715742 | Root | 16.650 |
| SRR9715743 | Root | 14.346 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 0.321 |
| SRR8749028 | MeJA induced 9h | 0.377 |
| SRR8749029 | MeJA induced 9h | 0.000 |
| SRR8749030 | Uninduced | 0.148 |
| SRR8749031 | Uninduced | 0.102 |
| SRR8749032 | Uninduced | 0.046 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 18.749 |
| SRR8400027 | Control - Root | 16.389 |