Gene detail information of Glyur000202s00015388 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT3G62820.1 | 6.00E-40 | Plant invertase/pectin methylesterase inhibitor superfamily protein |
| NR | XP_004495957.1 | 6.78E-109 | PREDICTED: 21 kDa protein-like [Cicer arietinum] |
| Swissprot | tr|P17407|21KD_DAUCA | 2.00E-29 | 21 kDa protein (Precursor) |
| trEMBL | tr|V7D1N5|V7D1N5_PHAVU | 1.00E-89 | Uncharacterized protein {ECO:0000313|EMBL:ESW35106.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00202 | 34999 | 35598 | + |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
|
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur000202s00015388.1 | PF04043.10 | PMEI | 32 | 184 | 6.30E-31 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 1.664 |
| SRR1783600 | control | 1.797 |
| SRR1783602 | moderate drought stress | 2.276 |
| SRR1811619 | moderate drought stress | 2.119 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 2.246 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 1.938 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 5.249 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 5.530 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 0.597 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 0.738 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 20.140 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 21.109 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 2.078 |
| SRR2868004 | Drought Stress (root) | 3.577 |
| SRR2967015 | Control (root) | 1.620 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 14.409 |
| SRR9715740 | Leaf | 4.984 |
| SRR9715741 | Leaf | 6.030 |
| SRR9715739 | Root | 0.042 |
| SRR9715742 | Root | 0.103 |
| SRR9715743 | Root | 0.544 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 2.951 |
| SRR8749028 | MeJA induced 9h | 1.430 |
| SRR8749029 | MeJA induced 9h | 2.293 |
| SRR8749030 | Uninduced | 1.946 |
| SRR8749031 | Uninduced | 0.138 |
| SRR8749032 | Uninduced | 2.106 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 1.727 |
| SRR8400027 | Control - Root | 1.668 |