Gene detail information of Glyur000201s00012382 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT3G18300.1 | 2.00E-07 | |
| NR | KHN21599.1 | 1.21E-83 | hypothetical protein glysoja_023451 [Glycine soja] |
| trEMBL | tr|I1K5M2|I1K5M2_SOYBN | 6.00E-84 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA05G34710.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00201 | 188723 | 189514 | + |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| -- | -- | -- | -- | -- | -- |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 0.452 |
| SRR1783600 | control | 0.345 |
| SRR1783602 | moderate drought stress | 0.306 |
| SRR1811619 | moderate drought stress | 0.333 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 0.000 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 0.000 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 0.000 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 0.073 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 0.139 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 0.140 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 0.339 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 0.112 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 14.908 |
| SRR2868004 | Drought Stress (root) | 29.412 |
| SRR2967015 | Control (root) | 26.277 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 0.168 |
| SRR9715740 | Leaf | 0.117 |
| SRR9715741 | Leaf | 0.006 |
| SRR9715739 | Root | 0.018 |
| SRR9715742 | Root | 0.522 |
| SRR9715743 | Root | 0.386 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 0.088 |
| SRR8749028 | MeJA induced 9h | 0.042 |
| SRR8749029 | MeJA induced 9h | 0.023 |
| SRR8749030 | Uninduced | 0.000 |
| SRR8749031 | Uninduced | 0.345 |
| SRR8749032 | Uninduced | 0.018 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 5.312 |
| SRR8400027 | Control - Root | 2.800 |