Gene detail information of Glyur000201s00012380 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT1G67060.1 | 3.00E-84 | |
| NR | XP_003524364.1 | 4.61E-147 | PREDICTED: uncharacterized protein LOC100814166 isoform X1 [Glycine max] |
| trEMBL | tr|K7KRJ2|K7KRJ2_SOYBN | 2.00E-147 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA05G34690.2} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00201 | 170794 | 174017 | - |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur000201s00012380.1 | PF13398.1 | Peptidase_M50B | 24 | 215 | 1.10E-57 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 2.378 |
| SRR1783600 | control | 2.458 |
| SRR1783602 | moderate drought stress | 1.056 |
| SRR1811619 | moderate drought stress | 1.252 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 3.520 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 3.370 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 0.127 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 0.000 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 0.575 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 0.582 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 0.691 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 0.741 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 8.042 |
| SRR2868004 | Drought Stress (root) | 4.529 |
| SRR2967015 | Control (root) | 6.254 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 0.841 |
| SRR9715740 | Leaf | 0.033 |
| SRR9715741 | Leaf | 0.004 |
| SRR9715739 | Root | 0.970 |
| SRR9715742 | Root | 0.711 |
| SRR9715743 | Root | 0.937 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 4.613 |
| SRR8749028 | MeJA induced 9h | 2.333 |
| SRR8749029 | MeJA induced 9h | 1.845 |
| SRR8749030 | Uninduced | 0.233 |
| SRR8749031 | Uninduced | 0.421 |
| SRR8749032 | Uninduced | 0.271 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 10.681 |
| SRR8400027 | Control - Root | 8.836 |