Gene detail information of Glyur000201s00012379


Functional Annotation

DatabaseOrthologsE valueAnnotation
TAIRAT3G02560.27.00E-86Ribosomal protein S7e family protein
NRXP_007160383.18.27E-128hypothetical protein PHAVU_002G317200g [Phaseolus vulgaris]
Swissprottr|Q9ZNS1|RS7_AVIMR3.00E-11540S ribosomal protein S7
trEMBLtr|V7CSN7|V7CSN7_PHAVU3.00E-128Uncharacterized protein {ECO:0000313|EMBL:ESW32378.1}

Sequence

Transcript Sequence
Protein Sequence


Location information (JBrowse)

ScaffoldStartEndStrand
Scaffold00201166519168257+


Gene family

Gene familysubfamily
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KEGG pathway

KOEnzymeEnzyme IDpathwaymapID
----------


Gene Ontology

biological_process

GO:0006412  translation


cellular_component

GO:0005622  intracellular

GO:0005840  ribosome


molecular_function

GO:0003735  structural constituent of ribosome

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Pfam domain

ProteinPfam accessionPfam nameAlignment startAlignment endE-value
Glyur000201s00012379.1PF01251.13Ribosomal_S7e61904.10E-79


Expression pattern

SRP053019

SRA ExperimentDescriptionTPM
SRR1783599control157.155
SRR1783600control158.853
SRR1783602moderate drought stress157.833
SRR1811619moderate drought stress156.459

DRP000996

SRA ExperimentDescriptionTPM
DRR006519Root Summer glycyrrhizin high producing strain383.103
DRR006520Root Summer glycyrrhizin high producing strain379.039
DRR006521Root Winter glycyrrhizin high producing strain209.596
DRR006522Root Winter glycyrrhizin high producing strain204.769
DRR006523Root Summer glycyrrhizin low producing strain284.415
DRR006524Root Summer glycyrrhizin low producing strain285.663
DRR006525Leaf Summer glycyrrhizin high producing strain104.509
DRR006526Leaf Summer glycyrrhizin high producing strain103.020

SRP065514

SRA ExperimentDescriptionTPM
SRR2867873Salt Stress (root)471.081
SRR2868004Drought Stress (root)271.825
SRR2967015Control (root)249.124

SRP215420

SRA ExperimentDescriptionTPM
SRR9715738Leaf168.259
SRR9715740Leaf169.649
SRR9715741Leaf152.564
SRR9715739Root210.627
SRR9715742Root205.882
SRR9715743Root218.952

SRP188776

SRA ExperimentDescriptionTPM
SRR8749027MeJA induced 9h824.134
SRR8749028MeJA induced 9h244.343
SRR8749029MeJA induced 9h525.341
SRR8749030Uninduced107.638
SRR8749031Uninduced54.445
SRR8749032Uninduced122.387

SRP175571

SRA ExperimentDescriptionTPM
SRR8400026NaCl treatment - Root373.214
SRR8400027Control - Root331.977

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State Key Laboratory of Plant Physiology and Biochemistry, College of Biological Sciences, China Agricultural University. All rights reserved