Gene detail information of Glyur000200s00011175 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT1G27990.1 | 5.00E-66 | |
| NR | XP_003630344.1 | 9.50E-140 | hypothetical protein MTR_8g094540 [Medicago truncatula] |
| trEMBL | tr|G7LF10|G7LF10_MEDTR | 4.00E-140 | Transmembrane protein, putative {ECO:0000313|EMBL:AET04820.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00200 | 211392 | 213255 | + |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| -- | -- | -- | -- | -- | -- |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 1.341 |
| SRR1783600 | control | 1.294 |
| SRR1783602 | moderate drought stress | 1.366 |
| SRR1811619 | moderate drought stress | 1.282 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 4.242 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 3.049 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 5.105 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 5.432 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 3.674 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 3.430 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 2.816 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 3.340 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 1.328 |
| SRR2868004 | Drought Stress (root) | 1.594 |
| SRR2967015 | Control (root) | 1.293 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 5.835 |
| SRR9715740 | Leaf | 6.431 |
| SRR9715741 | Leaf | 4.753 |
| SRR9715739 | Root | 1.041 |
| SRR9715742 | Root | 2.464 |
| SRR9715743 | Root | 1.979 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 2.225 |
| SRR8749028 | MeJA induced 9h | 0.734 |
| SRR8749029 | MeJA induced 9h | 1.550 |
| SRR8749030 | Uninduced | 0.947 |
| SRR8749031 | Uninduced | 0.702 |
| SRR8749032 | Uninduced | 0.390 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 1.953 |
| SRR8400027 | Control - Root | 2.301 |