Gene detail information of Glyur000200s00011168 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT3G14880.2 | 1.00E-36 | |
| NR | XP_004503896.1 | 2.34E-135 | PREDICTED: transcription factor HBP-1b(c38)-like [Cicer arietinum] |
| Swissprot | tr|O24160|TGA21_TOBAC | 3.00E-20 | TGACG-sequence-specific DNA-binding protein TGA-2.1 |
| trEMBL | tr|K7KR83|K7KR83_SOYBN | 3.00E-125 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA05G32880.2} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00200 | 173855 | 174712 | + |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
|
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur000200s00011168.1 | PF14144.1 | DOG1 | 38 | 117 | 1.10E-26 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 2.551 |
| SRR1783600 | control | 2.679 |
| SRR1783602 | moderate drought stress | 1.046 |
| SRR1811619 | moderate drought stress | 1.157 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 0.532 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 0.501 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 18.213 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 17.447 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 7.848 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 7.605 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 1.339 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 1.264 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 1.553 |
| SRR2868004 | Drought Stress (root) | 1.253 |
| SRR2967015 | Control (root) | 1.861 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 0.074 |
| SRR9715740 | Leaf | 0.070 |
| SRR9715741 | Leaf | 0.229 |
| SRR9715739 | Root | 5.817 |
| SRR9715742 | Root | 0.447 |
| SRR9715743 | Root | 1.277 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 5.417 |
| SRR8749028 | MeJA induced 9h | 0.841 |
| SRR8749029 | MeJA induced 9h | 5.929 |
| SRR8749030 | Uninduced | 0.476 |
| SRR8749031 | Uninduced | 2.424 |
| SRR8749032 | Uninduced | 2.671 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 2.294 |
| SRR8400027 | Control - Root | 1.594 |