Gene detail

Gene detail information of Glyur000200s00011165

Functional Annotation

Database	Orthologs	E value	Annotation
TAIR	AT5G64440.1	7.00E-112	fatty acid amide hydrolase
NR	XP_004503894.1	0	PREDICTED: fatty acid amide hydrolase-like isoform X2 [Cicer arietinum]
COG	YP_436814.1	5.00E-98	Asp-tRNAAsn/Glu-tRNAGln amidotransferase subunit A-like protein [Hahella chejuensis KCTC 2396]
Swissprot	tr\|Q7XJJ7\|FAAH_ARATH	2.00E-142	Fatty acid amide hydrolase
trEMBL	tr\|G7LFP2\|G7LFP2_MEDTR	0	Fatty acid amide hydrolase-like protein {ECO:0000313\|EMBL:AET04836.1}

Sequence

Transcript Sequence

>Glyur000200s00011165.1
GTACTATGCAAATGAATTGGCGACATGTTCAGCATGCAGCCAAAAGCCNAAAAAGAACATAAAAAAATAATAATTTGGAATCTGTATATATGAGGAGGATATAATGTTCAGTTCTTTGTTTTTCTCATGCAAGTTCCAACTGTTAATGAAAATGACATGTTTTCTAGATTTCATGTCAAATCCAAAACCATCAACATGAACAGCAAGATTTGCAATCTCCGCCTATTCTTCCTATAATATGTAATCTTTTCTGTCCATCTTCCAAAGAGCAACTTTGTTAGACTAATGGGTTTGTTCAAAAGAAAGGGTGTAGTTTACAAGCCAGTGAAGGATGTCAATTTAGGCNCTGATAGCAGTGAATTCTATCTCCAAGCCAATGTCAAAGCTCCCCGCATGACTGGAATCTTGGTCAAGATTTTCACTTGGTTCTTGGAGTCTCGAATATTTGGAGCCTTGCTATTGCATATATTGAAGGGAAACNATCTTATTCATGAGCTTATTACAAATGCAGATTTAGAAGAGACACCCCTCTATGTTCCTTTACATCATTTTGAAGACCACAAAGAACAAGAAGTCAAATGCTTGGATTCTTCTTTGACTCCACCAGAAAAAGTTCAACTTGCAATAGATTGCTTACCTACNTCTTCAGAAACGCCACTTAATGGAACAAAGCCTTCATTTTGTCGCTGGACTATAATGGACTATTCCAGAGCCTACAGATCAGGAGATATAACACCGCGCATGGTTGCTGAACGATTTATAGCTGTTGTTGACGAATCTTCAAAACCTCCACTCCAAATGGGATTCTTCATTAACTACAATGCTGAAGATATACTTAGACAAGCGGATGAATCAACTCTTCGGTATCAGAAAGGGGAACCTATCTCTGTGCTGGATGGAGTTCCTGTCGCTATCAAGGATGAAATAGATTGTTTGCCATATCCTACGACAGGAGGTACAAAGTGGNTGCACAAACAAAGGCCATGTACAGATGATGCTTGCTGCGTTAAGCGACTAAGATTATGNGGCGCCATACTCGTTGGGAAGACTAATATGCATGAACTTGGGGCTGGAACTAGTGGTATCAATCCACATTATGGGGCTGCTAGAAACCCATATGATGCAAATAGGATTGCAGGAGGTTCTTCTAGTGGATCTGCTGCTGTGGTGTCTGCAGGGTTGTGCCCTGTTGCCCTTGGTGTGGATGGAGGAGGATCTGTGAGGATGCCTGCAGCTCTTTGTGGTGTTGTTGGCCTGAAACCAACTTTTGATCGTGTACCTCATTCTGGAGTTATTCCTCTAAACTGGACAGTTGGGATGGTTGGAATACTAGCAGNCACTGTTGAGGATGCATTGATCGCTTATGCAGCAATCAGTGGTGAAATTCCATCTCATCAGCCCTCTAGTATTCCTTGGTTCGATGATTGCAGTGATGATGTCAGAATATGCTGTTCCCATGCCCTGAGCAAGCTCCAGGATCATTATGGTTGGAAGAGTGTTCCACTTCACTTGATTCTTTTAGAGACAAAATCAGGATGGGATACAAGGGTAGCACTCAACATCTATGGTGCTTTCAGCAGCAAGGAGTATATTAAAGCTCAGAAGATTAGGAATCGCCAATTGCAGTTTCACAAGAAAATATTTACCGAGGCAGATGTGATTGTGTCACCAACAACAGGTGTGACTGCATACCCGATTCAAGATGATGCACTCAAGACCGGTGAACTTGATTACATCAACGGAGCCGCACTTATTCAGTATTCCATATCAGGAAACTTCCTGGGACTTCCTGCTGTCACTATTGCGGTTGGTTATGATAAATTGGGCTTACCCATTGGGCTTCAGTTTATAGGAAGGCCCTGGGCCGAAGCAACACTGATCCACTTGGCATTTGCAATGCAGGCCATCTGCTTGTCAGAATACAGAAAACCAACTATTTTTTACGATCTGCTGAGAAAAAAATAAATACACCCGAATACATCAGAAGGAAATGTGCACCAGCATTGCATGTGACAATTGGCATGTCTATTCAAGCGAAAGCCAAAAGCAGTGTCAAGCTGTCATGTTTGATTTATCTATCTATCTATCTATTTACCGTTAACAAAAGAACATTTTTTGGTA

Protein Sequence

Location information (JBrowse)

Scaffold	Start	End	Strand
Scaffold00200	150441	156528	-

Gene family

Gene family	subfamily
--	--

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID
--	--	--	--	--

Gene Ontology

molecular_function
GO:0016884 carbon-nitrogen ligase activity, with glutamine as amido-N-donor

Pfam domain

Protein	Pfam accession	Pfam name	Alignment start	Alignment end	E-value
Glyur000200s00011165.1	PF01425.16	Amidase	180	374	2.50E-69
Glyur000200s00011165.1	PF01425.16	Amidase	431	531	7.90E-16

Expression pattern

SRP053019

SRA Experiment	Description	TPM
SRR1783599	control	12.870
SRR1783600	control	12.940
SRR1783602	moderate drought stress	7.651
SRR1811619	moderate drought stress	7.796

DRP000996

SRA Experiment	Description	TPM
DRR006519	Root Summer glycyrrhizin high producing strain	0.126
DRR006520	Root Summer glycyrrhizin high producing strain	0.197
DRR006521	Root Winter glycyrrhizin high producing strain	0.000
DRR006522	Root Winter glycyrrhizin high producing strain	0.000
DRR006523	Root Summer glycyrrhizin low producing strain	0.000
DRR006524	Root Summer glycyrrhizin low producing strain	0.000
DRR006525	Leaf Summer glycyrrhizin high producing strain	11.642
DRR006526	Leaf Summer glycyrrhizin high producing strain	11.291

SRP065514

SRA Experiment	Description	TPM
SRR2867873	Salt Stress (root)	9.146
SRR2868004	Drought Stress (root)	11.842
SRR2967015	Control (root)	9.282

SRP215420

SRA Experiment	Description	TPM
SRR9715738	Leaf	9.243
SRR9715740	Leaf	6.717
SRR9715741	Leaf	12.039
SRR9715739	Root	4.549
SRR9715742	Root	5.783
SRR9715743	Root	6.011

SRP188776

SRA Experiment	Description	TPM
SRR8749027	MeJA induced 9h	0.101
SRR8749028	MeJA induced 9h	0.217
SRR8749029	MeJA induced 9h	0.077
SRR8749030	Uninduced	0.139
SRR8749031	Uninduced	0.072
SRR8749032	Uninduced	0.062

SRP175571

SRA Experiment	Description	TPM
SRR8400026	NaCl treatment - Root	23.570
SRR8400027	Control - Root	23.933