Gene detail information of Glyur000200s00011164 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT3G05270.2 | 7.00E-76 | Plant protein of unknown function (DUF869) |
| NR | XP_004503890.1 | 0 | PREDICTED: filament-like plant protein-like isoform X1 [Cicer arietinum] |
| Swissprot | tr|Q9MA92|FPP3_ARATH | 6.00E-142 | Filament-like plant protein 3 |
| trEMBL | tr|I1K528|I1K528_SOYBN | 0 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA05G32920.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00200 | 139595 | 144636 | + |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur000200s00011164.1 | PF05911.6 | DUF869 | 90 | 281 | 2.40E-62 |
| Glyur000200s00011164.1 | PF05911.6 | DUF869 | 336 | 414 | 3.60E-14 |
| Glyur000200s00011164.1 | PF05911.6 | DUF869 | 414 | 606 | 2.10E-31 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 3.870 |
| SRR1783600 | control | 3.803 |
| SRR1783602 | moderate drought stress | 1.956 |
| SRR1811619 | moderate drought stress | 2.044 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 13.818 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 13.767 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 2.615 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 2.598 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 10.844 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 10.855 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 7.313 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 7.189 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 10.811 |
| SRR2868004 | Drought Stress (root) | 12.098 |
| SRR2967015 | Control (root) | 12.875 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 6.201 |
| SRR9715740 | Leaf | 4.777 |
| SRR9715741 | Leaf | 3.982 |
| SRR9715739 | Root | 0.182 |
| SRR9715742 | Root | 2.465 |
| SRR9715743 | Root | 2.007 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 24.631 |
| SRR8749028 | MeJA induced 9h | 47.182 |
| SRR8749029 | MeJA induced 9h | 26.206 |
| SRR8749030 | Uninduced | 8.552 |
| SRR8749031 | Uninduced | 10.658 |
| SRR8749032 | Uninduced | 6.188 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 7.827 |
| SRR8400027 | Control - Root | 7.481 |