Gene detail

Gene detail information of Glyur000200s00011156.1

Functional Annotation

Database	Orthologs	E value	Annotation
TAIR	AT5G63770.1	0	diacylglycerol kinase 2
NR	XP_006580353.1	0	PREDICTED: diacylglycerol kinase 2-like [Glycine max]
COG	YP_003251160.1	2.00E-11	diacylglycerol kinase catalytic subunit [Fibrobacter succinogenes subsp. succinogenes S85]
Swissprot	tr\|Q9FFN7\|DGK2_ARATH	0	Diacylglycerol kinase 2
trEMBL	tr\|I1K533\|I1K533_SOYBN	0	Diacylglycerol kinase {ECO:0000256\|RuleBase:RU361128}

Sequence

Transcript Sequence

>Glyur000200s00011156.1
GCCCGTGTATCGCACATGTCAACTTCCTAGTTGTTCAAAAAACGAGAATAGATATATGATTTTATTTTAATGAAAAACAAAATTATAAAAAAAATGGAAGAGACGGGGAACGCGTTGCTCACGCCCCATCCAACAGGGAGGCCGTGTATTGAGCAATGGAAATCCCGCCCCTTTTCCGTTCCTCTCTCTCCCTGCCTTTTGCTTTTTTGCTCTGTACATATAAAAAATTATATAAATATAATAATAATACACGNCTTACTTTTTAATTAAGCAAGCTGAAAAAGAAGGGGCTAAAAATTGGACTCAAAATCAAAACGCTGAAACCAAAAATACGATGATGATGATGATGATGAAAATGAAAATGATAATATAGGAATTGGAGTAATGTTTCCTTGGAAGAAGGGGAAGAGAGGGGTTGTAACAGGATTCTGTTAAGCTACAATCCCGATTTCCCTCTCTCGCTCTCTGCAACCTCCGTTCAGGTTTTATGTTTGGTAGCCAAGTTCAAACGAATGAGCTTCATCATGATAGATTTGGGAATTGCTATTTTGAGGCTGGTCACAAGCCCTGATGCTTCGGGTGCATCTATTTTTGGATGGCTGATCACTGGATCACTTGGACTTATGGCTGTCATATATGCTGTTCTCAAGTGGCAGCGAAGATCGTCTTTGAATTGGATTAAGGCTGCGGCCAGAGAAAAGAAGAAAGTTTGGAAAAAGTTTAAAGTACCTCTATCAGAACATTCCTGGGTTGAAGATTTTACTTATAGGGAGCAGCCATCCACTTGTTGTTTCTGCTTGACTTCCCTCTGGCCTTCTCAAAATTTAGGTACAACAGCCTCACCACGTACTCCTCTCCATCGTTGCTCTGTTTGTGGTGTCGCGGCTCATTTCCTTTGTTCTCAGTTTGCAGCAAAGGATTGCAAATGTGTGGCTCAGGCTGGTTTTAGTCATATTCGACACCACTGGTCAGAAAGATGGGTTAATGTNGATGAAAATCATGAGATGTCTGCCTTCTGCTTTTACTGTGACGAACCGTGTGGTGTTCCATTTGTCAAAGCTTCTCCTACATGGCATTGCCGGTGGTGTCAGCGCCTCATTCATGTGAAATGTCATAACAAATTGACAAGAGATTCTGGTGATTTTTGCGATTTGGGTCCTTTGAGGCCAGCTATCCTCTCTCCTCTCTGTGTTAAAGAAGTTGATGAAGATCAAAAGGGAGGGCGACTAAGTTCTATTATAACCTCTTCTGTTCGTGGTCAGATTAGAAAGCGGCGTAACCGAAATAAACATGGAGGTAGCTTCCATGCTAATGGTAAGTCACGTGATTCGTCGGTTACTGATTCAACACTATTGGAATATGTGTTGAATGGTCTCCATTGGGACAAGTCCAGTGATGAGAAGCTCTTTGGCCTCAAGAACAATGGTAGGGTATTAGGAAATGGTTTAACTGCTCCCCCCAGCCAAATCAAGAAATACACATTGGTTGATTTGCCAAATGATGCTAGGCCACTTTTGGTCTTCATCAATGCCAGGAGTGGTGGGCAGGTTGGGCCGTCTCTTCACAGGAGATTGAATATGCTACTAAATCCTGTTCAGATATTTGAATTGAGTGCCTCTCAAGGTCCCGAGGTAGGCCTGGAATTATTCAAAAGTGTACGGTATTTTAGAGTATTGGTATGTGGTGGGGATGGTACTGTTGCGTGGGTCCTTGATGCTATAGAAAGACACAATTTTGAGTCACCTCCACCTGTTGCAATTATTCCCCTAGGCACTGGAAATGATTTGTCCAGGGTACTGAATTGGGGAAGAGGCTCCTCTGCGCTTGATGGACAAGGCGGGTTGACCATGCTCTTGCATGACATTAGCAATGCAGCAGTTACTATGCTAGATCGCTGGGAAGTTAAANTTGCAGAAGAAAGCTCTGAAGGAAAACCATATAAAGTGAAAACNAAATCCATGATGAACTACCTAGGCATTGGATGTGATGCAAAGGTTGCATATGAATTTCATGTTACCCGAGAGATAAATCCTGAGAAGTTTAGTAGTCAGTTTTTGAATAAATTACGATATGCAAAAGAAGGAGCAAGAGACATTATGGACAGAACTTGTGCTGACTTGCCATGGCAAGTATGGCTTGAAGTTGATGGGAGAGACATTGATNTTCCCAAGGATTCAGAGGGCTTAATTGTGCTTAATATTGGGAGCTATATGGGTGGAGTAGATCTTTGGCAAAATGACTATGAGCATGATGATGATTTCAGTCATCAGTTCATGCATGATAAAATGCTTGAGGTAGTATGTGTTTGTGGAGCATGGCACCTTGGAAAACTTCAGGTTGGACTTTCACAAGCAAGAAGACTAGCTCAAGGTAAAGTCATCAAGATACACGCTTCCAGTCCTTTCCCAGTTCAAATAGATGGGGAACCATTTATCCTACAACCGGGCTACATGGAGATAACTCATCGTGGGCAGGTATTCATGTTGAGGAGGACTTCAGAAGATGAGCCTAAAGGGCATGCAGCTGCTATTATGGCAGAGGTATTACTAGATGCCGAGTGCAAGGGCATNATTAATGCATCTCAGAAGAAAGTTCTTCTCCAGGACGTGGCCATCCATCTTTCTTAAGATCCACCTGTTCAGCCCGCTTAAATAGTTGCCCATACTTGGGTTTTTGTCCTCCAATCCTTTTTTATAGGATCAATTTTTATTTTTTTTGTAATTCTCAAAAGAGAGAGAGAGAGAGAGAGAGAGAGATAGTTCCACACTTCCACTTTCTACTTCCACGAAACAGGTAATAGAGTGAAAACTGAGCGGCGGCATGGTCAAGGTTTTCCTTTACTTTGTTGTGAATTGCGTCNAACACCCTACGCTACGCTGTGTATATTGTAGCCAGGCGTTGTATTATGTTTTCTTGAAATCCTTGTAGTTGTTTTTAGCGAAATGTTTGATGGACCGCTACAGTATACCCCCATACACTTTTACTGTTCATTTTATGCATTGTGGGGAAGTATACTGTAGCGGTATAGGTGTTCACCTATCACTGCTGTTGTTTTTATACTGCCACACGAGTGAGATTAGAGAAAACAACAATTAANATGCATATATCTATGGTCTTGCTTTAAGAATACCGATTGGGGAATATTTTTATATATTCTGTTAAAGACTTCC

Protein Sequence

Location information (JBrowse)

Scaffold	Start	End	Strand
Scaffold00200	100203	107415	-

Gene family

Gene family	subfamily
--	--

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID
K00901	dgkA, DGK	EC:2.7.1.107	Glycerolipid metabolism	map00561
			Glycerophospholipid metabolism	map00564
			Phosphatidylinositol signaling system	map04070
			Phospholipase D signaling pathway	map04072
			Choline metabolism in cancer	map05231

Gene Ontology

biological_process

GO:0007205 protein kinase C-activating G-protein coupled receptor signaling pathway

GO:0035556 intracellular signal transduction

molecular_function

GO:0004143 diacylglycerol kinase activity

GO:0016301 kinase activity

Pfam domain

Protein	Pfam accession	Pfam name	Alignment start	Alignment end	E-value
Glyur000200s00011156.1	PF00130.17	C1_1	150	209	4.50E-11
Glyur000200s00011156.1	PF00781.19	DAGK_cat	333	462	1.40E-28
Glyur000200s00011156.1	PF00609.14	DAGK_acc	483	639	1.50E-54

Expression pattern

SRP053019

SRA Experiment	Description	TPM
SRR1783599	control	6.135
SRR1783600	control	6.245
SRR1783602	moderate drought stress	6.675
SRR1811619	moderate drought stress	6.719

DRP000996

SRA Experiment	Description	TPM
DRR006519	Root Summer glycyrrhizin high producing strain	12.208
DRR006520	Root Summer glycyrrhizin high producing strain	12.433
DRR006521	Root Winter glycyrrhizin high producing strain	21.162
DRR006522	Root Winter glycyrrhizin high producing strain	20.997
DRR006523	Root Summer glycyrrhizin low producing strain	27.887
DRR006524	Root Summer glycyrrhizin low producing strain	28.584
DRR006525	Leaf Summer glycyrrhizin high producing strain	7.310
DRR006526	Leaf Summer glycyrrhizin high producing strain	7.721

SRP065514

SRA Experiment	Description	TPM
SRR2867873	Salt Stress (root)	11.991
SRR2868004	Drought Stress (root)	12.733
SRR2967015	Control (root)	11.698

SRP215420

SRA Experiment	Description	TPM
SRR9715738	Leaf	61.317
SRR9715740	Leaf	28.817
SRR9715741	Leaf	46.317
SRR9715739	Root	19.653
SRR9715742	Root	56.849
SRR9715743	Root	51.592

SRP188776

SRA Experiment	Description	TPM
SRR8749027	MeJA induced 9h	12.440
SRR8749028	MeJA induced 9h	7.934
SRR8749029	MeJA induced 9h	6.376
SRR8749030	Uninduced	4.157
SRR8749031	Uninduced	5.662
SRR8749032	Uninduced	4.289

SRP175571

SRA Experiment	Description	TPM
SRR8400026	NaCl treatment - Root	13.557
SRR8400027	Control - Root	17.000