Gene detail

Gene detail information of Glyur000200s00011153.1

Functional Annotation

Database	Orthologs	E value	Annotation
TAIR	AT5G63710.1	0	Leucine-rich repeat protein kinase family protein
NR	XP_003532154.1	0	PREDICTED: probable LRR receptor-like serine/threonine-protein kinase At5g63710-like [Glycine max]
COG	YP_708736.1	4.00E-21	protein kinase/ LuxR family transcriptional regulator [Rhodococcus jostii RHA1]
Swissprot	tr\|Q8W4S5\|Y5371_ARATH	0	Probable LRR receptor-like serine/threonine-protein kinase At5g63710 (Precursor)
trEMBL	tr\|I1KNY9\|I1KNY9_SOYBN	0	Uncharacterized protein {ECO:0000313\|EnsemblPlants:GLYMA08G00650.1}

Sequence

Transcript Sequence

>Glyur000200s00011153.1
GTTCTTGTTCCTTAATTCCATCCTCTTAACTTGTCCTGTTTTTAACTTGTGTCAAACATGAAGAACATCCATGCATGTGGTNTGAAAATATGTGTAGACATGTAGAAACCTCGTTTTTGGTTGGAACTTGGAATAGATGTTCTGTTTTGGTTGCTTATTAAGCTGTTGTGTGTATTTTCCTTGGAGACCAAAGAGGTTTACATGTTTCGCCCAAATCTTAGTGGAGCTCCTCTCAATATATCGATGAGGTGGCTCATATTCCTTCTTGTTGTCTTGAAACTGAGTTATGCAATCAAAGATCCTGATGTAGAAGGTGAAGCTCTGCTTGATCTTTTGTATTACCTCAATGATTCCAATAATCAAATAACAGACTGGGATAGTCATTTAGTCAGCCCGTGTTTCAGCTGGTCACATGTCACCTGTAGGAATGGACATGTCATATCTCTGACCCTGGCTTCGATTGGATTTTCTGGAACACTTTCTCCCTCAATTGCCAAATTGAAATATTTGGTTAACTTGGAATTGCAGAACAACAATCTGTCAGGCCCCTTACCTGATTACATAGCCAACTTGACGTCCCTACAATATCTAAACCTTGCTGACAATAATTTTAATGGTGCTATACCAGCTACATGGGGTCAACTATCCAATCTCAAGAATCTGGATCTTTCATCTAACGGTCTTACCGGAAGTATCCCAATGCAACTCTTTTCAGTTCCAGTGTTTAACTTTTCAGATACACACCTTCAATGTGGTTCAAGCTTCGAGCAGCCTTGTGATTCTAAATCTGAACATCCAGATTCATCAACCAACAAATCAAAACTAGCAAAAGTTCTACGTCTTGCAAGTTGTGGTGCATTTGCACTTCTGTTTCTTGGGGCTATCTTTACATACAGATACCATCAAAAGCACAGACAGAAAAGTGANGTCTTTGTTGATGTTTTAGGTGAAGATGAGAGCAAAATTTCCTTTGGGCAATTGAGAAGATTTTCTTTGCGTGAACTCCAACTTGCTACTAAAAATTTCAGTGAGAGCAATGTAATTGGCCAGGGTGGCTTTGGAAAAGTNTACAAAGGAGTACTCTCAGATAATACAAAAATCGCTGTGAAACGCCTCACTGATTATCATAATCCTGGTGGAGAGGCTGCATTCGAGAGAGAAGTTCTACTCATAAGTGTTGCAGTTCATAGGAACCTCCTGAGATTAATCGGGTTCTGTACAACCTCAACCGAAAGAATCCTTGTATATCCTTTCATGGAAAATCTAAGCGTAGCATATCAATTGAGAGATTTAAAACCTGATGAGAAAGGCTTGGACTGGCCAACAAGGAAACGCGTGGCATTTGGCACAGCCCATGGTTTGGAATATCTACACGAGCAATGCAATCCGAAGATAATTCACCGTGATCTAAAGGCTGCAAATATCCTNCTAGATGATGAGTTTGAAGCTGTTCTGGGTGATTTTGGGCTAGCCAAGCTGGTTGATGCAAGGATGACTCATGTCACCACTCAAGTTCGNGGTACAATGGGTCATATTGCCCCAGAATATTTGTCCACCGGAAAATCATCAGAGAAGACAGATGTTTTTGGATATGGCATAACACTTCTTGAACTAGTCACCGGTCAGCGTGCAATAGACCTCTCTCGGCTCGAAGAGGAGGAGGATGTTCTTCTGATTGATCACGTGAAAAATCTGCTAAGAGAAAATAGGCTGGAGGACATTGTGGATAGAAATTTGGAGAGTTATGATCCAAAAGAAGTTGAGACCATTCTTCAGGTTGCATTGCTTTGCACNCAAGGCTTTCCGGAGGATCGTCCAACGATGTCAGAGGTGGTGAAGATGCTGCAGGGAGTTGGGTTGGCAGATAGATGGGCTGATTGGAAGCAACTTGAAGAGGCAAGGAATCAAGAATTGTCTCTCATGACTCACCAATTTGTTTGGAGTGATGAATCTACTCTTGATCAAGAAGCTATACAGCTTTCTAGAGCAAGATAAACAGGCACAACTGAAGTCAATTTTGAATTTTGAAACGTGGTTTCTTTGTTAAGTTTATCATAGAATATATATTTGTATATGTATGTACTTAACTATGCTCTAAAGAAAGAGGCATACGTATACACCTTAAAAGCCTGTGTTATATATATAGTGATGGATATATTGTATACAACGGAAAAGAAAGGAATGAAGGGGTTGGGCACAGATGATTTGTTGCATTTGAATACAGGCGAAGATTCAGATTGCAATATGTGTATCATATCANAACAACGTGTGCCTTCTGTAACCTTGGGTAAGTCTTGTTCTTGTAATAGTAATAGTTGCTATATAATCTTTCTTTCTAGTTTCTTTGTTTACCTTACCTTTG

Protein Sequence

Location information (JBrowse)

Scaffold	Start	End	Strand
Scaffold00200	71208	75728	+

Gene family

Gene family	subfamily
Protein Kinases Family	PPC:1.12.2

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID
--	--	--	--	--

Gene Ontology

biological_process
GO:0006468 protein phosphorylation

molecular_function

GO:0004672 protein kinase activity

GO:0005524 ATP binding

GO:0016772 transferase activity, transferring phosphorus-containing groups

Pfam domain

Protein	Pfam accession	Pfam name	Alignment start	Alignment end	E-value
Glyur000200s00011153.1	PF08263.7	LRRNT_2	37	74	0.00031
Glyur000200s00011153.1	PF12799.2	LRR_4	125	162	2.00E-08
Glyur000200s00011153.1	PF00069.20	Pkinase	278	546	1.50E-41

Expression pattern

SRP053019

SRA Experiment	Description	TPM
SRR1783599	control	19.004
SRR1783600	control	19.238
SRR1783602	moderate drought stress	19.159
SRR1811619	moderate drought stress	18.999

DRP000996

SRA Experiment	Description	TPM
DRR006519	Root Summer glycyrrhizin high producing strain	34.974
DRR006520	Root Summer glycyrrhizin high producing strain	34.717
DRR006521	Root Winter glycyrrhizin high producing strain	1.883
DRR006522	Root Winter glycyrrhizin high producing strain	1.835
DRR006523	Root Summer glycyrrhizin low producing strain	53.874
DRR006524	Root Summer glycyrrhizin low producing strain	54.017
DRR006525	Leaf Summer glycyrrhizin high producing strain	34.652
DRR006526	Leaf Summer glycyrrhizin high producing strain	34.619

SRP065514

SRA Experiment	Description	TPM
SRR2867873	Salt Stress (root)	43.743
SRR2868004	Drought Stress (root)	76.191
SRR2967015	Control (root)	102.250

SRP215420

SRA Experiment	Description	TPM
SRR9715738	Leaf	32.289
SRR9715740	Leaf	39.199
SRR9715741	Leaf	41.983
SRR9715739	Root	8.212
SRR9715742	Root	58.989
SRR9715743	Root	50.651

SRP188776

SRA Experiment	Description	TPM
SRR8749027	MeJA induced 9h	3.121
SRR8749028	MeJA induced 9h	0.646
SRR8749029	MeJA induced 9h	2.435
SRR8749030	Uninduced	0.072
SRR8749031	Uninduced	0.000
SRR8749032	Uninduced	0.180

SRP175571

SRA Experiment	Description	TPM
SRR8400026	NaCl treatment - Root	51.262
SRR8400027	Control - Root	51.008