Gene detail information of Glyur000200s00011140 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT4G24290.2 | 1.00E-133 | MAC/Perforin domain-containing protein |
| NR | KHN17422.1 | 0 | MACPF domain-containing protein [Glycine soja] |
| Swissprot | tr|Q9STW5|MACP2_ARATH | 4.00E-160 | MACPF domain-containing protein At4g24290 |
| trEMBL | tr|K7KRA3|K7KRA3_SOYBN | 0 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA05G33080.3} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00200 | 373 | 4069 | - |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur000200s00011140.1 | PF01823.14 | MACPF | 100 | 272 | 4.50E-21 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 0.000 |
| SRR1783600 | control | 0.005 |
| SRR1783602 | moderate drought stress | 0.000 |
| SRR1811619 | moderate drought stress | 0.000 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 0.000 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 0.000 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 0.068 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 0.065 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 1.395 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 1.601 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 0.257 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 0.261 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 8.671 |
| SRR2868004 | Drought Stress (root) | 8.874 |
| SRR2967015 | Control (root) | 7.109 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 1.016 |
| SRR9715740 | Leaf | 0.417 |
| SRR9715741 | Leaf | 0.722 |
| SRR9715739 | Root | 0.000 |
| SRR9715742 | Root | 0.095 |
| SRR9715743 | Root | 0.091 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 0.000 |
| SRR8749028 | MeJA induced 9h | 0.703 |
| SRR8749029 | MeJA induced 9h | 0.000 |
| SRR8749030 | Uninduced | 0.430 |
| SRR8749031 | Uninduced | 0.094 |
| SRR8749032 | Uninduced | 0.023 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 0.151 |
| SRR8400027 | Control - Root | 0.313 |