Gene detail information of Glyur000199s00018218 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| NR | NP_001176827.1 | 5.65E-11 | Os12g0188566 [Oryza sativa Japonica Group] |
| trEMBL | tr|B9GC78|B9GC78_ORYSJ | 2.00E-11 | Os12g0188566 protein {ECO:0000313|EMBL:BAH95555.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00199 | 132996 | 136563 | + |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| -- | -- | -- | -- | -- | -- |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 2.805 |
| SRR1783600 | control | 3.655 |
| SRR1783602 | moderate drought stress | 2.655 |
| SRR1811619 | moderate drought stress | 3.097 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 3.793 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 3.609 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 5.121 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 4.215 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 4.251 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 2.849 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 4.126 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 4.693 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 5.097 |
| SRR2868004 | Drought Stress (root) | 6.204 |
| SRR2967015 | Control (root) | 4.710 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 7.738 |
| SRR9715740 | Leaf | 4.616 |
| SRR9715741 | Leaf | 7.661 |
| SRR9715739 | Root | 0.952 |
| SRR9715742 | Root | 5.343 |
| SRR9715743 | Root | 4.308 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 3.114 |
| SRR8749028 | MeJA induced 9h | 3.002 |
| SRR8749029 | MeJA induced 9h | 4.161 |
| SRR8749030 | Uninduced | 4.895 |
| SRR8749031 | Uninduced | 3.619 |
| SRR8749032 | Uninduced | 3.588 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 5.105 |
| SRR8400027 | Control - Root | 5.711 |