Gene detail information of Glyur000199s00018207 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT5G48920.1 | 5.00E-05 | tracheary element differentiation-related 7 |
| NR | XP_003588562.1 | 2.67E-28 | hypothetical protein MTR_1g008620 [Medicago truncatula] |
| trEMBL | tr|G7I4E5|G7I4E5_MEDTR | 1.00E-28 | Transmembrane protein, putative {ECO:0000313|EMBL:AES58813.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00199 | 72273 | 72635 | + |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| -- | -- | -- | -- | -- | -- |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 0.124 |
| SRR1783600 | control | 0.083 |
| SRR1783602 | moderate drought stress | 0.420 |
| SRR1811619 | moderate drought stress | 0.381 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 5.808 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 5.237 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 0.000 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 0.000 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 14.291 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 14.266 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 5.666 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 5.994 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 22.931 |
| SRR2868004 | Drought Stress (root) | 13.260 |
| SRR2967015 | Control (root) | 13.982 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 0.000 |
| SRR9715740 | Leaf | 0.000 |
| SRR9715741 | Leaf | 0.724 |
| SRR9715739 | Root | 0.630 |
| SRR9715742 | Root | 13.166 |
| SRR9715743 | Root | 12.435 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 0.000 |
| SRR8749028 | MeJA induced 9h | 0.146 |
| SRR8749029 | MeJA induced 9h | 0.000 |
| SRR8749030 | Uninduced | 0.000 |
| SRR8749031 | Uninduced | 0.000 |
| SRR8749032 | Uninduced | 0.000 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 3.260 |
| SRR8400027 | Control - Root | 4.628 |