Gene detail information of Glyur000199s00018204 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT1G77160.1 | 1.00E-33 | Protein of unknown function (DUF506) |
| NR | XP_007019405.1 | 5.44E-73 | Uncharacterized protein TCM_035453 [Theobroma cacao] |
| trEMBL | tr|A0A061FH12|A0A061FH12_THECC | 2.00E-73 | Uncharacterized protein {ECO:0000313|EMBL:EOY16630.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00199 | 58412 | 59751 | + |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur000199s00018204.1 | PF04720.7 | DUF506 | 32 | 228 | 1.50E-49 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 0.378 |
| SRR1783600 | control | 0.465 |
| SRR1783602 | moderate drought stress | 0.014 |
| SRR1811619 | moderate drought stress | 0.000 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 0.000 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 0.000 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 0.000 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 0.000 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 0.000 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 0.000 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 0.731 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 0.791 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 3.606 |
| SRR2868004 | Drought Stress (root) | 4.519 |
| SRR2967015 | Control (root) | 3.285 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 4.994 |
| SRR9715740 | Leaf | 4.845 |
| SRR9715741 | Leaf | 6.195 |
| SRR9715739 | Root | 0.342 |
| SRR9715742 | Root | 1.946 |
| SRR9715743 | Root | 2.439 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 16.064 |
| SRR8749028 | MeJA induced 9h | 34.214 |
| SRR8749029 | MeJA induced 9h | 53.758 |
| SRR8749030 | Uninduced | 3.076 |
| SRR8749031 | Uninduced | 2.785 |
| SRR8749032 | Uninduced | 11.366 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 2.048 |
| SRR8400027 | Control - Root | 1.776 |