Gene detail information of Glyur000199s00018200 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT1G21360.1 | 3.00E-46 | glycolipid transfer protein 2 |
| NR | KHN28742.1 | 3.05E-103 | Pleckstrin likey domain-containing family A member 8 [Glycine soja] |
| trEMBL | tr|K7M796|K7M796_SOYBN | 1.00E-103 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA14G28652.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00199 | 29266 | 30662 | + |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
|
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur000199s00018200.1 | PF08718.6 | GLTP | 51 | 156 | 5.90E-28 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 0.171 |
| SRR1783600 | control | 0.121 |
| SRR1783602 | moderate drought stress | 0.063 |
| SRR1811619 | moderate drought stress | 0.128 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 0.000 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 0.000 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 0.000 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 0.000 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 0.000 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 0.000 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 0.000 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 0.000 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 36.631 |
| SRR2868004 | Drought Stress (root) | 37.016 |
| SRR2967015 | Control (root) | 35.218 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 0.000 |
| SRR9715740 | Leaf | 0.000 |
| SRR9715741 | Leaf | 0.000 |
| SRR9715739 | Root | 0.105 |
| SRR9715742 | Root | 0.000 |
| SRR9715743 | Root | 0.073 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 0.621 |
| SRR8749028 | MeJA induced 9h | 3.615 |
| SRR8749029 | MeJA induced 9h | 0.867 |
| SRR8749030 | Uninduced | 1.304 |
| SRR8749031 | Uninduced | 1.420 |
| SRR8749032 | Uninduced | 0.575 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 12.526 |
| SRR8400027 | Control - Root | 7.985 |