Gene detail information of Glyur000199s00018197 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| NR | XP_003522605.1 | 4.28E-10 | PREDICTED: uncharacterized protein LOC100799545 isoform X1 [Glycine max] |
| trEMBL | tr|I1JZE8|I1JZE8_SOYBN | 2.00E-10 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA04G43600.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00199 | 7023 | 8075 | + |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| -- | -- | -- | -- | -- | -- |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 7.096 |
| SRR1783600 | control | 7.245 |
| SRR1783602 | moderate drought stress | 14.162 |
| SRR1811619 | moderate drought stress | 15.511 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 4.131 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 3.208 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 0.784 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 0.790 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 1.345 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 2.307 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 1.906 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 1.802 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 2.085 |
| SRR2868004 | Drought Stress (root) | 3.212 |
| SRR2967015 | Control (root) | 3.509 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 3.927 |
| SRR9715740 | Leaf | 2.811 |
| SRR9715741 | Leaf | 3.580 |
| SRR9715739 | Root | 1.084 |
| SRR9715742 | Root | 1.249 |
| SRR9715743 | Root | 1.354 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 1.173 |
| SRR8749028 | MeJA induced 9h | 2.010 |
| SRR8749029 | MeJA induced 9h | 1.489 |
| SRR8749030 | Uninduced | 0.422 |
| SRR8749031 | Uninduced | 0.387 |
| SRR8749032 | Uninduced | 0.829 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 3.204 |
| SRR8400027 | Control - Root | 4.544 |