Gene detail information of Glyur000199s00018196 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT5G53310.1 | 3.00E-66 | myosin heavy chain-related |
| NR | XP_003541574.1 | 1.38E-128 | PREDICTED: myosin IB heavy chain-like [Glycine max] |
| trEMBL | tr|I1LX78|I1LX78_SOYBN | 5.00E-129 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA13G08460.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00199 | 3535 | 6254 | + |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
|
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur000199s00018196.1 | PF06017.8 | Myosin_TH1 | 46 | 210 | 2.20E-35 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 32.182 |
| SRR1783600 | control | 32.392 |
| SRR1783602 | moderate drought stress | 41.724 |
| SRR1811619 | moderate drought stress | 41.722 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 44.438 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 47.012 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 22.362 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 21.430 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 78.427 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 77.088 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 14.066 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 13.851 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 34.447 |
| SRR2868004 | Drought Stress (root) | 36.535 |
| SRR2967015 | Control (root) | 40.832 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 18.887 |
| SRR9715740 | Leaf | 25.996 |
| SRR9715741 | Leaf | 26.105 |
| SRR9715739 | Root | 17.732 |
| SRR9715742 | Root | 21.026 |
| SRR9715743 | Root | 20.365 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 18.524 |
| SRR8749028 | MeJA induced 9h | 9.931 |
| SRR8749029 | MeJA induced 9h | 10.823 |
| SRR8749030 | Uninduced | 3.695 |
| SRR8749031 | Uninduced | 1.166 |
| SRR8749032 | Uninduced | 3.416 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 43.549 |
| SRR8400027 | Control - Root | 39.167 |