Gene detail information of Glyur000198s00008761 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT1G27510.1 | 1.00E-160 | Protein of unknown function (DUF3506) |
| NR | XP_004501935.1 | 0 | PREDICTED: protein EXECUTER 1, chloroplastic-like [Cicer arietinum] |
| Swissprot | tr|Q93YW0|EXEC1_ARATH | 2.00E-103 | Protein EXECUTER 1, chloroplastic (Precursor) |
| trEMBL | tr|G7J5H8|G7J5H8_MEDTR | 0 | Executer 1 {ECO:0000313|EMBL:AES71534.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00198 | 226374 | 231326 | - |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur000198s00008761.1 | PF12014.3 | DUF3506 | 454 | 583 | 9.30E-43 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 2.023 |
| SRR1783600 | control | 2.029 |
| SRR1783602 | moderate drought stress | 2.793 |
| SRR1811619 | moderate drought stress | 2.789 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 6.495 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 6.486 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 4.091 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 3.879 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 7.523 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 7.620 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 13.210 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 13.127 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 8.676 |
| SRR2868004 | Drought Stress (root) | 9.441 |
| SRR2967015 | Control (root) | 10.218 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 17.854 |
| SRR9715740 | Leaf | 21.558 |
| SRR9715741 | Leaf | 13.269 |
| SRR9715739 | Root | 1.027 |
| SRR9715742 | Root | 2.900 |
| SRR9715743 | Root | 2.874 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 10.403 |
| SRR8749028 | MeJA induced 9h | 10.758 |
| SRR8749029 | MeJA induced 9h | 10.896 |
| SRR8749030 | Uninduced | 6.006 |
| SRR8749031 | Uninduced | 4.871 |
| SRR8749032 | Uninduced | 4.493 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 5.871 |
| SRR8400027 | Control - Root | 5.962 |