Gene detail

Gene detail information of Glyur000198s00008740

Functional Annotation

Database	Orthologs	E value	Annotation
TAIR	AT5G33320.1	1.00E-132	Glucose-6-phosphate/phosphate translocator-related
NR	XP_003550731.1	0	PREDICTED: triose phosphate/phosphate translocator, non-green plastid, chloroplastic-like [Glycine max]
Swissprot	tr\|Q84QU8\|PPT2_ORYSJ	3.00E-175	Phosphoenolpyruvate/phosphate translocator 2, chloroplastic (Precursor)
trEMBL	tr\|I1MTG4\|I1MTG4_SOYBN	0	Uncharacterized protein {ECO:0000313\|EnsemblPlants:GLYMA17G09630.1}

Sequence

Transcript Sequence

>Glyur000198s00008740.1
GGTTTTTTAGGTCTCTCACTGGTGGAGNGAGAGAAGAGACAAACGAGACATACACGGCCTTCTGAGTTTTGACTCTCCGATCTCAAAAATGCAGGGCGCGGTTTCACCTCTATCCTCTTCCCTTTCCCTCTCCAAACCTCGCAGTACCTGGTTCCAGTTTCACACAATCCGTGCCTCCGTTTCCACTTCCAAACCCAACCACGTCCTCAACAATGCCTCTTCCTCTTCCTTTTCATATTCCTTCCCATGCACCGCTCTCGCTTCTTCTTATTCCTCTTCTTCAAAACTCATTCCCTCGTCACCCCTCCCTTCCTCCCACTTCCATCCCAGGGCAACCGCCAGCACCACCGCCGCAGACTCCTCCGACAGCAGCAGTTTCTTCAAAACTCTGGAGCTCGGTGCCCTCTTTGGCCTCTGGTTCCTCTTTAACATCTACTTCAACATCTACAACAAACAGGTATTGAAGGTGTACCATTTCCCGGTAACTCTAACTGCTATTCAATTTGCTGTGGGGACTCTCCTTGTAGCGTTTATGTGGGGTTTTAATCTCTATAAGAGGCCAACACTCAGTGGCGCCCAGCTTCTGGCAATATTTCCGCTGGCTCTGGTGCATACTTTAGGGAACCTTTTCACTAACATGAGTCTTGGAAAGGTCGCTGTGTCTTTCACTCATACTGTAAAAGCAACGGAGCCTTTATTTTCAGTGATCCTGTCTTCTATGTTCCTTGGAGAGATGCCTACCGCATGGGTGGTTACTTCCCTTGTGCCTATTATCGGTGGGGTGGCGCTTGCGTCTGTTACGGAGGCCTCTTTCAATTGGGTTGGGTTTTGGAGTGCAATGGCTTCCAATTTGACAAATCAATCACGTAATGTTCTCAGCAAAAAGCTCATGGTTAAGAAGGAGGATTCCGTAGACAACATAACCCTCTTCTCAATAATAACAGTCATGTCCTTCTTGTTATCAGCACCTCTAACCATCTTCATAGAGGGTGTCAAATTTACCCCGGCTTACCTGCAATCTGCGGGATTAAATGTTCAACAAGTGTTCATCAGATCTCTTCTTGCTGCGCTCTGTTTCCATGCATATCAGCAAGTTTCTTATATGATACTGGCGAGGGTATCACCTGTTACCCACTCCGTGGGAAACTGTGTGAAGCGGGTGGTGGTTATCGTGAGCTCAGTCATTTTCTTCCGAACACCTGTCTCACCAATTAACGCATTTGGGACTGCTATAGCTCTTGCAGGTGTTTTCCTCTATTCCAGGGTGAAGCGAATTAAGCCAAAGACTGCTTAATTTTCAGTCGTAAAATTTTGCTAGTAGCATAACACAAACACACACACACACACACAGTTGTTACATATCTAATTTCTTTATAGGTCAGATAGGGATTTAGGGTTATCTTTCTTGACCCCTCCCCCTTCAGTTTTTTAGTTTGGTTGTTGATTTCACTACGCATGTCTGAGTGGCGCCTAATGGTTCTACTCTATGAAAAATATATCGTCATTTAAT

Protein Sequence

Location information (JBrowse)

Scaffold	Start	End	Strand
Scaffold00198	105203	108511	+

Gene family

Gene family	subfamily
--	--

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID
--	--	--	--	--

Gene Ontology

biological_process
GO:0006810 transport

cellular_component

GO:0016020 membrane

GO:0016021 integral component of membrane

molecular_function
GO:0005215 transporter activity

Pfam domain

Protein	Pfam accession	Pfam name	Alignment start	Alignment end	E-value
Glyur000198s00008740.1	PF00892.15	EamA	119	236	1.10E-12
Glyur000198s00008740.1	PF03151.11	TPT	246	392	4.70E-43

Expression pattern

SRP053019

SRA Experiment	Description	TPM
SRR1783599	control	0.374
SRR1783600	control	0.343
SRR1783602	moderate drought stress	0.048
SRR1811619	moderate drought stress	0.048

DRP000996

SRA Experiment	Description	TPM
DRR006519	Root Summer glycyrrhizin high producing strain	0.789
DRR006520	Root Summer glycyrrhizin high producing strain	0.779
DRR006521	Root Winter glycyrrhizin high producing strain	0.073
DRR006522	Root Winter glycyrrhizin high producing strain	0.072
DRR006523	Root Summer glycyrrhizin low producing strain	0.755
DRR006524	Root Summer glycyrrhizin low producing strain	0.755
DRR006525	Leaf Summer glycyrrhizin high producing strain	7.661
DRR006526	Leaf Summer glycyrrhizin high producing strain	7.558

SRP065514

SRA Experiment	Description	TPM
SRR2867873	Salt Stress (root)	7.002
SRR2868004	Drought Stress (root)	4.583
SRR2967015	Control (root)	3.566

SRP215420

SRA Experiment	Description	TPM
SRR9715738	Leaf	19.399
SRR9715740	Leaf	17.523
SRR9715741	Leaf	17.311
SRR9715739	Root	0.196
SRR9715742	Root	1.510
SRR9715743	Root	0.570

SRP188776

SRA Experiment	Description	TPM
SRR8749027	MeJA induced 9h	5.929
SRR8749028	MeJA induced 9h	3.068
SRR8749029	MeJA induced 9h	3.565
SRR8749030	Uninduced	8.812
SRR8749031	Uninduced	3.698
SRR8749032	Uninduced	2.511

SRP175571

SRA Experiment	Description	TPM
SRR8400026	NaCl treatment - Root	0.800
SRR8400027	Control - Root	0.474