Gene detail information of Glyur000198s00008737 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT5G62960.1 | 4.00E-103 | |
| NR | XP_004508875.1 | 0 | PREDICTED: uncharacterized protein LOC101497660 [Cicer arietinum] |
| trEMBL | tr|A0A072UQ63|A0A072UQ63_MEDTR | 0 | Transmembrane protein, putative {ECO:0000313|EMBL:KEH31832.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00198 | 90067 | 92920 | - |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| -- | -- | -- | -- | -- | -- |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 2.560 |
| SRR1783600 | control | 2.627 |
| SRR1783602 | moderate drought stress | 1.459 |
| SRR1811619 | moderate drought stress | 1.437 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 5.872 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 5.735 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 0.230 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 0.150 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 15.023 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 15.148 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 1.095 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 1.066 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 3.007 |
| SRR2868004 | Drought Stress (root) | 3.876 |
| SRR2967015 | Control (root) | 3.355 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 2.519 |
| SRR9715740 | Leaf | 0.604 |
| SRR9715741 | Leaf | 1.218 |
| SRR9715739 | Root | 0.591 |
| SRR9715742 | Root | 8.015 |
| SRR9715743 | Root | 5.824 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 1.430 |
| SRR8749028 | MeJA induced 9h | 0.349 |
| SRR8749029 | MeJA induced 9h | 1.370 |
| SRR8749030 | Uninduced | 0.020 |
| SRR8749031 | Uninduced | 0.121 |
| SRR8749032 | Uninduced | 0.051 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 1.868 |
| SRR8400027 | Control - Root | 2.920 |