Gene detail information of Glyur000198s00008732 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT5G50290.1 | 3.00E-98 | |
| NR | XP_006579571.1 | 0 | PREDICTED: uncharacterized protein LOC100818252 isoform X2 [Glycine max] |
| trEMBL | tr|K7KMR5|K7KMR5_SOYBN | 0 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA05G02360.2} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00198 | 76008 | 77797 | - |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
|
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur000198s00008732.1 | PF13947.1 | GUB_WAK_bind | 33 | 137 | 1.50E-15 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 1.627 |
| SRR1783600 | control | 1.707 |
| SRR1783602 | moderate drought stress | 2.139 |
| SRR1811619 | moderate drought stress | 2.188 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 3.199 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 3.093 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 0.000 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 0.000 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 2.657 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 2.580 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 1.469 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 1.397 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 5.288 |
| SRR2868004 | Drought Stress (root) | 3.714 |
| SRR2967015 | Control (root) | 3.990 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 1.593 |
| SRR9715740 | Leaf | 0.212 |
| SRR9715741 | Leaf | 0.629 |
| SRR9715739 | Root | 0.728 |
| SRR9715742 | Root | 1.525 |
| SRR9715743 | Root | 1.597 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 0.872 |
| SRR8749028 | MeJA induced 9h | 0.046 |
| SRR8749029 | MeJA induced 9h | 0.059 |
| SRR8749030 | Uninduced | 0.000 |
| SRR8749031 | Uninduced | 0.053 |
| SRR8749032 | Uninduced | 0.000 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 3.062 |
| SRR8400027 | Control - Root | 4.031 |