Gene detail information of Glyur000197s00010106 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT1G34000.1 | 2.00E-41 | one-helix protein 2 |
| NR | XP_003556162.1 | 2.49E-79 | PREDICTED: uncharacterized protein LOC100776918 isoform X1 [Glycine max] |
| trEMBL | tr|I1NH47|I1NH47_SOYBN | 9.00E-80 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA20G30940.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00197 | 252097 | 257017 | + |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| -- | -- | -- | -- | -- | -- |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 6.717 |
| SRR1783600 | control | 6.663 |
| SRR1783602 | moderate drought stress | 4.363 |
| SRR1811619 | moderate drought stress | 4.512 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 6.396 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 6.336 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 4.957 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 4.881 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 10.761 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 11.103 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 109.828 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 108.604 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 7.056 |
| SRR2868004 | Drought Stress (root) | 5.802 |
| SRR2967015 | Control (root) | 4.777 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 100.314 |
| SRR9715740 | Leaf | 133.624 |
| SRR9715741 | Leaf | 79.867 |
| SRR9715739 | Root | 2.834 |
| SRR9715742 | Root | 6.952 |
| SRR9715743 | Root | 5.470 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 8.607 |
| SRR8749028 | MeJA induced 9h | 9.142 |
| SRR8749029 | MeJA induced 9h | 6.617 |
| SRR8749030 | Uninduced | 4.234 |
| SRR8749031 | Uninduced | 3.659 |
| SRR8749032 | Uninduced | 5.886 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 11.946 |
| SRR8400027 | Control - Root | 12.188 |