Gene detail information of Glyur000197s00010105 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT1G22790.2 | 1.00E-42 | |
| NR | KHN46392.1 | 7.89E-134 | hypothetical protein glysoja_031710 [Glycine soja] |
| trEMBL | tr|I1NH48|I1NH48_SOYBN | 3.00E-134 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA20G30950.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00197 | 246931 | 251788 | + |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| -- | -- | -- | -- | -- | -- |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 18.114 |
| SRR1783600 | control | 17.853 |
| SRR1783602 | moderate drought stress | 13.765 |
| SRR1811619 | moderate drought stress | 15.086 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 22.653 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 21.607 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 11.256 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 11.945 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 19.458 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 22.493 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 10.910 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 11.615 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 41.195 |
| SRR2868004 | Drought Stress (root) | 44.740 |
| SRR2967015 | Control (root) | 42.421 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 27.786 |
| SRR9715740 | Leaf | 26.721 |
| SRR9715741 | Leaf | 30.035 |
| SRR9715739 | Root | 20.830 |
| SRR9715742 | Root | 23.611 |
| SRR9715743 | Root | 21.309 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 19.844 |
| SRR8749028 | MeJA induced 9h | 20.361 |
| SRR8749029 | MeJA induced 9h | 16.183 |
| SRR8749030 | Uninduced | 13.492 |
| SRR8749031 | Uninduced | 9.637 |
| SRR8749032 | Uninduced | 10.792 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 37.645 |
| SRR8400027 | Control - Root | 46.260 |