Gene detail information of Glyur000197s00010104 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT4G09830.1 | 4.00E-57 | Uncharacterised conserved protein UCP009193 |
| NR | AFK42100.1 | 1.60E-134 | unknown [Lotus japonicus] |
| trEMBL | tr|I3SPA8|I3SPA8_LOTJA | 6.00E-135 | Uncharacterized protein {ECO:0000313|EMBL:AFK42100.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00197 | 237095 | 240708 | + |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| -- | -- | -- | -- | -- | -- |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 43.640 |
| SRR1783600 | control | 43.844 |
| SRR1783602 | moderate drought stress | 37.344 |
| SRR1811619 | moderate drought stress | 36.824 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 43.343 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 42.837 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 58.122 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 56.017 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 48.649 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 49.342 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 6.448 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 6.209 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 18.184 |
| SRR2868004 | Drought Stress (root) | 15.256 |
| SRR2967015 | Control (root) | 17.256 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 7.006 |
| SRR9715740 | Leaf | 7.344 |
| SRR9715741 | Leaf | 5.542 |
| SRR9715739 | Root | 17.941 |
| SRR9715742 | Root | 16.509 |
| SRR9715743 | Root | 18.029 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 63.665 |
| SRR8749028 | MeJA induced 9h | 38.590 |
| SRR8749029 | MeJA induced 9h | 70.338 |
| SRR8749030 | Uninduced | 27.282 |
| SRR8749031 | Uninduced | 39.013 |
| SRR8749032 | Uninduced | 39.732 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 20.779 |
| SRR8400027 | Control - Root | 20.699 |