Gene detail information of Glyur000197s00010094 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT4G10380.1 | 3.00E-109 | NOD26-like intrinsic protein 5;1 |
| NR | XP_003535560.1 | 0 | PREDICTED: probable aquaporin NIP5-1-like [Glycine max] |
| COG | NP_866369.1 | 5.00E-43 | nodulin-26 [Rhodopirellula baltica SH 1] |
| Swissprot | tr|Q9SV84|NIP51_ARATH | 1.00E-145 | Probable aquaporin NIP5-1 |
| trEMBL | tr|I1LDC5|I1LDC5_SOYBN | 0 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA10G36560.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00197 | 168740 | 172800 | + |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
|
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur000197s00010094.1 | PF00230.15 | MIP | 69 | 279 | 1.00E-48 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 43.264 |
| SRR1783600 | control | 43.691 |
| SRR1783602 | moderate drought stress | 63.053 |
| SRR1811619 | moderate drought stress | 63.000 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 6.416 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 6.506 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 26.696 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 26.096 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 8.732 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 8.377 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 2.328 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 2.459 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 153.538 |
| SRR2868004 | Drought Stress (root) | 181.103 |
| SRR2967015 | Control (root) | 193.523 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 7.683 |
| SRR9715740 | Leaf | 5.806 |
| SRR9715741 | Leaf | 6.004 |
| SRR9715739 | Root | 37.517 |
| SRR9715742 | Root | 18.541 |
| SRR9715743 | Root | 22.589 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 19.876 |
| SRR8749028 | MeJA induced 9h | 48.854 |
| SRR8749029 | MeJA induced 9h | 22.398 |
| SRR8749030 | Uninduced | 18.411 |
| SRR8749031 | Uninduced | 9.622 |
| SRR8749032 | Uninduced | 12.944 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 123.818 |
| SRR8400027 | Control - Root | 99.014 |