Gene detail information of Glyur000197s00010090 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT1G71710.2 | 9.00E-26 | DNAse I-like superfamily protein |
| NR | KHN17044.1 | 1.29E-96 | Type I inositol-1,4,5-trisphosphate 5-phosphatase 1 [Glycine soja] |
| Swissprot | tr|Q84MA2|IP5P1_ARATH | 1.00E-41 | Type I inositol 1,4,5-trisphosphate 5-phosphatase 1 |
| trEMBL | tr|I1LDC4|I1LDC4_SOYBN | 5.00E-97 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA10G36550.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00197 | 148056 | 158410 | + |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| -- | -- | -- | -- | -- | -- |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 1.935 |
| SRR1783600 | control | 1.853 |
| SRR1783602 | moderate drought stress | 2.346 |
| SRR1811619 | moderate drought stress | 2.262 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 2.011 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 2.093 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 0.090 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 0.126 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 2.057 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 1.634 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 0.189 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 0.183 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 1.663 |
| SRR2868004 | Drought Stress (root) | 1.982 |
| SRR2967015 | Control (root) | 2.830 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 0.447 |
| SRR9715740 | Leaf | 0.340 |
| SRR9715741 | Leaf | 0.461 |
| SRR9715739 | Root | 0.271 |
| SRR9715742 | Root | 1.535 |
| SRR9715743 | Root | 1.147 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 0.295 |
| SRR8749028 | MeJA induced 9h | 1.010 |
| SRR8749029 | MeJA induced 9h | 0.383 |
| SRR8749030 | Uninduced | 0.294 |
| SRR8749031 | Uninduced | 0.284 |
| SRR8749032 | Uninduced | 0.119 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 4.609 |
| SRR8400027 | Control - Root | 4.089 |